Campylobacter fetus subsp. fetus 82-40: CFF8240_0791
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Entry
CFF8240_0791 CDS
T00430
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cff
Campylobacter fetus subsp. fetus 82-40
Pathway
cff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFF8240_0791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cff03019
]
CFF8240_0791
Enzymes [BR:
cff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CFF8240_0791
Messenger RNA biogenesis [BR:
cff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFF8240_0791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
SUa-2TM
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABK82754
UniProt:
A0RP33
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Position
801778..803652
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AA seq
624 aa
AA seq
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MLFSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPIL
EKLSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQA
LKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKR
QNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDKKMELLNEVFG
VESIDQALVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTKILVA
TDIAARGLDIKELPFVINLELPNVPEDYVHRIGRTGRAGNDGVAISLVCVDEFKFLIDIE
KLIDKKLIRESFSGFEADLRVKPQPIRRGQNMNKSSERDDRNGNKIDKKERKPREFNSDK
KDESKRGRNRDDFKGEFRDRPKKDDKRKFDDKRSKFGFDKDFGTDERETKKDGDFKRKFK
KDESKREYRRDGVKSEFSKDKKEFSKNSRAKDSNSSFDGEAKREFKFKKDDKKFGEKKKS
FGDKKSFDDKDKKFSGEKKFSSDKKPRSSDKSSDEKYSGNKFSPKKKFGSDKPDRGDKFT
KDAPKPRASSRPRKPQSDKKSTTK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcagatttcgatctcagctctgctatattagaagcattaaaagagctaaat
tacgacgctcctacgcagatccaacaagtcgcgatacctgctataatgcaaggaaaagat
atcttagcaggagctaggacaggcacgggaaaaactgctgcatttgcgctacctatatta
gaaaaattatcgtcaaaagaacgcaacaaaaagcgtcctcaaactcgtgttttagtgctt
gttcctacaagagaacttgcaaatcaagtcacgcaaaacatcaaatcttacgcgaaaaag
ttaccgtttaaaactttgccagtatttggcggagttagctcttacccacaaattcaagct
ttaaaaagtggtatagatatcgtggtggcgactcctggcagacttttggatcttgctttg
caaaatgctttaagcttagagcatatcgatacgctagtatttgacgaggctgatcgtatg
tttgatatgggatttatccacgatatcaaacaaatagtaaaaatgcttcctgaaaaaaga
caaaatttactattttccgcgacgtatccaagtgaggttatgtcgctttgtaactctatg
ctaaaagatcctttgcgtatccaaatagaagagcaaaacagcactgctttaaatatcata
caacgcgtgattttagtagatcgagataaaaaaatggagcttttaaacgaggtttttgga
gtggagagtatagatcaagctttggtttttactcgtaccaaaagaagtgcggataaatgt
tcatcttatctacatactttaggctttagcgtagctgctttgcatggagataaaagtcaa
agcgtgcgttcaaaaacacttgagaaatttaaaaacggtaaaacaaaaattcttgtagca
acggatatagcagcgcgcggattagacataaaagaacttccgtttgttataaatttagag
cttccaaatgtgcctgaggattatgttcataggataggtagaacaggacgcgccggaaat
gatggcgttgcgatatctttggtttgcgttgatgagtttaagtttttaatcgatattgaa
aaattgatcgataaaaaactaataagagaaagctttagcggatttgaagccgatctaaga
gtaaaacctcagcctatcagacgtggacaaaatatgaacaaaagctcagaacgagatgac
agaaacggaaataaaatagataaaaaagagagaaagccaagagagtttaatagcgataaa
aaagacgagtcaaaacgcggtagaaatagagatgattttaagggtgaatttagggacaga
ccaaaaaaagacgataaaagaaaatttgatgataagagatctaaattcggctttgataaa
gactttggcacagatgagcgcgagacgaaaaaagacggcgattttaaacgtaaatttaaa
aaagacgagtcaaaacgcgaatacagaagagatggtgtcaagagtgaattttcaaaagac
aaaaaggaattttctaaaaatagtcgcgcaaaagattcaaatagtagttttgatggcgaa
gcaaaaagagaattcaaatttaaaaaagacgataaaaaatttggcgagaaaaagaaatct
ttcggcgataaaaaatcttttgatgacaaagacaaaaaatttagcggcgaaaagaaattt
agctctgataaaaagcctagaagtagtgacaaaagttctgatgaaaaatattctggtaat
aaatttagcccgaaaaagaaatttggaagtgacaaaccagacagaggcgataaatttact
aaagacgctccaaagccaagagcttcaagcagaccacgcaaaccacaatctgataaaaaa
tccactacaaaatag
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