Campylobacter fetus subsp. fetus 82-40: CFF8240_0871
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Entry
CFF8240_0871 CDS
T00430
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
cff
Campylobacter fetus subsp. fetus 82-40
Pathway
cff03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFF8240_0871 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cff03400
]
CFF8240_0871 (uvrB)
DNA repair and recombination proteins [BR:
cff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFF8240_0871 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFF8240_0871 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Kinesin
UB2H
Microtub_bd
DUF1574
AAA_22
AAA_16
Focal_AT
T2SSE
Flavoprotein
HAAS
AAA_7
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABK83001
UniProt:
A0RPB3
LinkDB
All DBs
Position
872702..874678
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AA seq
658 aa
AA seq
DB search
MDKFEISSKFKPSDDQEKAVTNIVDSIRSGNKFNVLLGVTGSGKTFTMANVIKRLNMPTL
IMTHNKSLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIPRQDLFIEKDSSINEELER
LRLSATANLLEFDDVVVVASVSANYGLGNPAEYKGMVLLLSLGMSLNQKELLLKLVDMGY
KRNDAYFDRGDFRVNGDVVDIYPAYFNDEAIRLEFFGDELDAMYHFDVLENKRTKDVSKF
ILYATSQFIVGENRLKQAIKDIELELEDRLAFYEKENRLVEYQRLKQRVEFDLEMLSSTG
STKGVENYARYLTGQKAGETPYSLFDYFEVSGKDYLVIVDESHVSLPQFRGMYAGDRSRK
EVLVEYGFRLPSALDNRPLKLDEFIAKKANYLFVSATPNQYEIDLSQGHVYEQILRPTGL
LDPRIEVISSDNQVEVLFDRAKAVIARGERVLVTTLTKKMSEELTRYYQELGIKVKYMHS
DIDAVERNELIRGLRKGEFDMLVGINLLREGLDLPEVSLVAVLDADKEGFLRSRTSLIQT
MGRAARNVNGTVILFANKITNSMKEAIDTTEARRKYQGDYNKKYGITPRSASRNLEDSLK
EEDLPNLYNKAKKLEKMPASERAKIVKELRKQMLEAAKNLEFEKAAALRDEIAKLREL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttgagatatctagtaaatttaagccaagtgatgatcaagaaaaagccgta
acaaacatagtagatagcataagatccggaaataaatttaacgtccttttaggagtaact
ggaagcggtaaaacttttacgatggcaaatgtgataaaacgcctaaatatgccgactctc
atcatgacacacaacaaaagcttagccgcgcagctttatagcgaattcaaaggctttttt
cctaaaaatcacgtcgagtatttcataagctactatgattactaccaacctgaagcctat
ataccgcgccaagatctttttatagaaaaagatagctctataaatgaagaattggagcgt
ttaagacttagtgcgactgcgaatttgcttgagtttgatgatgtggtagtcgtggcttcc
gtatctgcaaactacggtttaggaaatcctgctgaatataaaggtatggttttactgctg
agtttaggtatgagcttaaatcaaaaagagttacttttaaaactagtagatatgggatat
aaaagaaacgatgcgtactttgatcgtggagattttcgagtaaatggtgacgtggtagat
atctatccagcgtattttaacgatgaagccatcagacttgagttttttggagacgagctt
gacgctatgtatcactttgacgtattagaaaataaacgcactaaagacgttagcaaattt
atactatatgcaacaagtcagtttatagtcggcgaaaatagactaaaacaagcgataaaa
gatatcgagcttgaacttgaagataggcttgcattttatgaaaaagaaaatagattagtc
gagtatcaaaggcttaagcaaagagtggaatttgaccttgagatgctctcaagcaccgga
agtaccaaaggcgtagaaaattacgcgcgttatctaacagggcaaaaagcaggagagacg
ccgtattctttgtttgattactttgaagtgagcggcaaggactatcttgttatagtagat
gaaagccacgtgagtttgccacaatttcgcggaatgtacgcaggcgatagaagtagaaaa
gaggttttagtcgagtacggtttcagacttccttctgcgcttgataacagacctttgaaa
cttgatgagtttatagcaaaaaaggcaaactatctgtttgtctcagccactccaaaccag
tatgagatagatctctcacaaggtcatgtttatgagcaaatacttaggcctaccggactt
cttgatccacgcatagaagtcataagtagcgataatcaagtagaagttttgtttgatagg
gcaaaagcagtcatagcaagaggcgaaagagtgctagtaacgactctaactaaaaagatg
agtgaagagctaacgcgctactaccaagaacttggtatcaaggtcaaatacatgcactca
gacatcgacgcagtcgaaagaaacgagcttataagaggtcttagaaaaggggagttcgat
atgcttgttggtataaatttactccgtgaggggctagatctaccagaagtctctttggta
gctgttttagacgccgacaaagagggctttttaagaagtcgtacaagcctcatacaaact
atgggaagagcagctagaaacgtaaatggaacggttatattatttgcaaataaaataaca
aattctatgaaagaagccatagatacaactgaagcaaggcgtaaatatcagggcgattat
aacaaaaagtacggtataactccgcgctcggctagtagaaatttagaagatagcttaaaa
gaagaagatctaccaaatttatataacaaagccaaaaaattagaaaaaatgccggcgagt
gagcgagcaaaaatcgtaaaagaactaagaaaacagatgcttgaagcggctaagaatttg
gaatttgaaaaagctgcggctctaagagacgagatagcaaaacttagagagctttaa
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