Campylobacter fetus subsp. fetus 82-40: CFF8240_1238
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Entry
CFF8240_1238 CDS
T00430
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cff
Campylobacter fetus subsp. fetus 82-40
Pathway
cff03030
DNA replication
cff03430
Mismatch repair
cff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFF8240_1238
03430 Mismatch repair
CFF8240_1238
03440 Homologous recombination
CFF8240_1238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cff03032
]
CFF8240_1238
03400 DNA repair and recombination proteins [BR:
cff03400
]
CFF8240_1238
Enzymes [BR:
cff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFF8240_1238
DNA replication proteins [BR:
cff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFF8240_1238
DNA repair and recombination proteins [BR:
cff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFF8240_1238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ABK82743
UniProt:
A0RQB3
LinkDB
All DBs
Position
complement(1221356..1225351)
Genome browser
AA seq
1331 aa
AA seq
DB search
MSDFTHLHLHTEYSLLDGANKIKVLAKRLKELNIKSCAITDHGNMYGALDFYKTMKAEGI
KPIIGLEAYIHNHEDISNKESRQRFHLCLFAKNEVGYQNLMYLSSMSYIKGYYYHPRINK
KLLREHSEGLVCSSACLAGEVNFHLNLSDRNLKRGAGGYESAKRVALEYKDIFGDDFYLE
IMRHGIGDQQRIDDDIIRLSMETGIKLIATNDAHYTTKDSAVAQKIFVYISANKNFDDKV
REQVLSEFYAKSADEMSAIFADMPEVIENTNEIVEKCNLEIKLGDATPPNFKFTQEYAKE
RGIILPHPQNEYDLENDSFLFEYECKQGLEKRLEFIDPSKHQIYKDRLDLEINTINNMKF
PGYMLIVADFINEAKRRGIPVGPGRGSAAGSLVAYALRITDIDPLPYNLLFERFLNPERI
SMPDIDVDFCQNRRGEVIDYVIEKYGEYNVAQVATFGKLLAKGVIRDVARVMGMPYSEAD
AMAKLIPDELGITLKAHKNKKGDMEDGAFEKEPKIGELIAKNDLAKQVWEYSCELEGLNR
NPGMHAAGIVISNEELWKKAPLWKQSNAEAGHYVTQYTKDYLEDVDLIKFDFLGLKTLTV
IDNAKKLIKERFGVDILWEKIDFNDQKTYETIQSGNTLGIFQIESSGMQSLAAKLRPDCF
EDIIAMIALYRPGPLNSGMVDDFIDIKHGKKKIEYAFAALKPILEPTYGVIVYQEQVMQV
VQTVGGFSLGGADLVRRAMSKKKEDEMLHLKTQYLEGAKRNGFDEGKADALFELIMKFAE
YGFNKSHSAAYALITFQTAYLKTYYPAEFMAALLTSEENNIDKIIKYIDEIKRLNIKLLP
PNVNYSVREFSVIQKDGSDSIIYGMAAIKGVGVGAVEDIIKAREDGPFESVDSFISKTDC
TTVNRRVFESLIKSGAFDDFGFTRKMLIHNLETIIENSKRISDIKKNATNSLFSDDDSMS
EISVDLVNIKDEFDKKEILKFEQEILGVYVSGHPLDEYRDKIDKINYTVSSEFENVEDGS
EILVVGKIEDTTTKITKTGKKMAIINILDIHGNIEATAFDEYKKIESMSQNELDEPHAFK
IILNKDGQQFKLKINDIISLDDALYKRFTLKSSKLTDDEVFKFQNYFDTIKHATIKDIPN
LTKESEILIIGKMSHINIRTTKSGMEMAILNIVDISGNSEMIAFDSTSKFIANMSEDEQD
TIYAFKVAPNKDAQSKPIINQIISLDDAKDGNFTLKTNRRRYESRVNEQSASATIIGKLE
VDIDIISLDKQKINYIYQLAHSYHQKNGNKRLLLRITNNYDKEVMIFSTEFIVSDEFKSE
LDAILNEAKAG
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttcacacatttacatttacataccgaatattcattgttagacggtgcaaac
aagataaaagttttagccaaaagattaaaagagctaaatataaaatcatgcgctataacc
gatcacggaaatatgtatggggcgcttgatttttataaaactatgaaagccgagggtata
aaacctatcataggacttgaagcttatatacataatcacgaagatataagcaacaaagag
agtaggcagagatttcacctttgtctatttgctaaaaatgaggtaggatatcaaaatctt
atgtatcttagctcaatgtcgtatataaaaggatattactaccatccaagaatcaacaaa
aaacttttaagagaacatagcgaaggtttagtatgcagctctgcatgccttgctggagaa
gtaaatttccatttaaatttgagtgatagaaatttaaaaagaggagccggcggatatgaa
tctgccaaaagagttgctttggaatataaagatatatttggcgatgatttttatcttgag
attatgagacacggtataggtgatcaacaacgaatagatgatgatataatcaggctttct
atggaaaccggtataaaactaatagctacaaacgatgcccattataccacaaaagatagt
gcagtagctcaaaagatatttgtatatatctcagcaaataaaaatttcgatgataaagta
cgagaacaagttctaagcgagttttatgccaaatcggctgatgagatgagcgctattttt
gccgatatgccagaagttatagaaaatacaaacgagatagtagaaaagtgcaatttagaa
ataaaattaggagacgctactccaccaaattttaaatttactcaagaatatgcaaaagag
cgcggtataatcctgcctcatccgcaaaatgaatatgatttagaaaatgatagttttttg
tttgagtatgagtgcaaacaaggacttgaaaaaagactcgagtttatcgatccgtctaag
catcaaatttataaagatagattagatcttgagataaatacgataaataatatgaaattt
ccgggctatatgcttatagtggccgacttcataaacgaagcaaaaagacgaggaattcca
gtaggtcctgggcgtggaagtgcagctggaagccttgtagcttacgctcttcgcattact
gatattgatccgttgccttataacttgctatttgaaagatttttaaatccagagcgtata
agtatgccagatatcgatgtggatttttgccaaaataggcgaggggaagttatagattac
gtcatagaaaagtatggggaatacaacgtcgcccaagtagcaacatttggtaagcttttg
gcaaaaggcgttataagagacgttgcaagagttatgggtatgccatattccgaagcagat
gctatggcaaaacttataccagatgagttgggaattactttaaaagcgcataaaaataaa
aaaggcgatatggaagatggagcgttcgaaaaagagccgaaaataggtgaacttatagca
aaaaatgacttagcaaagcaggtttgggaatattcttgtgagcttgaaggattgaataga
aaccccggaatgcatgctgcaggtattgttataagcaatgaagagctatggaaaaaggct
cctttgtggaaacaaagcaatgccgaagccggtcattatgtaactcaatacacaaaagat
taccttgaagatgttgatcttatcaaatttgacttcttgggacttaaaactctaacagta
atcgataatgcaaaaaaactaattaaagagcgttttggcgtagatattttatgggaaaaa
atagatttcaacgatcaaaaaacttatgaaactattcaaagcggaaatactctgggtata
tttcagatagagtcaagcggtatgcaatctcttgctgcgaagcttagaccggattgtttt
gaagatatcatagctatgatagcgctttatcgtcccggacctttgaattccggaatggtt
gatgattttatagatattaagcacggtaagaaaaagatagaatacgctttcgccgcttta
aaacctatactcgaaccgacgtacggagttatagtttatcaagagcaagttatgcaagtt
gttcaaacagtcggaggatttagccttggaggcgcggatcttgtaaggcgcgctatgagt
aagaaaaaagaagatgaaatgttgcatctcaaaactcagtatttagaaggagcaaaaaga
aacggctttgatgaaggcaaagcagacgcactttttgagcttattatgaaatttgcagag
tatggatttaacaaatcccactcagcggcttatgcgcttataacttttcaaacagcgtat
ttaaaaacatattatccggcagaatttatggctgctttgcttactagcgaagagaacaat
atagataaaattataaaatatatcgatgagataaaaagacttaatataaagctacttcct
ccaaatgtaaattattcggtaagggagtttagtgttatacaaaaagatggaagcgactct
attatatacggcatggcagcgataaaaggcgttggagtaggcgctgtggaagatatcata
aaagctagagaagacggtccttttgaaagcgttgatagctttatatcaaaaacagattgc
acgactgtaaatagacgcgtttttgaatctcttataaaatctggcgcatttgatgacttt
ggttttactagaaagatgctcatacataatctagaaactatcatagaaaactcaaaacgt
atatcggatatcaaaaagaatgctacaaattctctatttagcgatgatgatagtatgagt
gagataagcgttgatcttgttaatatcaaagatgaatttgataaaaaagagatattgaaa
ttcgagcaagagatacttggagtttatgtttcgggtcatccattagacgagtatagagat
aaaatagataagataaattacacagtatcaagtgaatttgaaaatgtagaagatggaagt
gagatattagtagtaggtaagatagaagatacaactacaaagataacaaaaacaggtaaa
aaaatggctatcataaatatccttgatattcatgggaatatagaagctaccgcatttgac
gagtataaaaaaatagaatctatgagtcaaaatgagcttgatgagccacatgcgtttaaa
attattttaaataaagacggccagcagttcaagctaaaaataaatgacataataagcctt
gatgatgctttatataagagatttacgctgaaatcaagcaaacttacggatgacgaagta
tttaaatttcaaaattattttgatactatcaagcacgctacaataaaagatattccaaat
ttaaccaaagaaagtgaaatacttatcatagggaaaatgagtcatataaatattagaaca
actaaaagcggtatggaaatggctatattaaatatagttgatataagcggtaattccgag
atgatagcttttgattctactagtaaattcatagccaatatgagcgaagatgaacaagat
acaatatacgcttttaaagttgctccaaataaagacgctcagtcaaaacctataataaat
cagatcatcagtcttgatgatgcaaaagatggaaatttcactcttaaaacaaatagaaga
cgatatgagtctagagtgaatgaacaaagcgcctctgctactataataggaaagcttgaa
gttgatatagatattataagtttagataagcaaaaaataaattatatttatcaacttgct
cactcttatcatcaaaaaaatggaaataaaagattattacttagaataactaataattac
gataaagaagtgatgattttcagcactgaatttatcgttagtgatgagttcaaatcagag
ttagatgctatactaaacgaagctaaggcaggctaa
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