Corynebacterium freiburgense: CFREI_00160
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Entry
CFREI_00160 CDS
T09215
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cfg
Corynebacterium freiburgense
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfg03400
]
CFREI_00160 (phrB)
Enzymes [BR:
cfg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CFREI_00160 (phrB)
DNA repair and recombination proteins [BR:
cfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CFREI_00160 (phrB)
Prokaryotic type
CFREI_00160 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WJZ01349
LinkDB
All DBs
Position
complement(31610..32845)
Genome browser
AA seq
411 aa
AA seq
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MGPLNAPTILWLRRDLRVFDHPGFEAVLQSPNPRIIYSNDAPASPFQRRFLHETLQELAR
NIRDFGLELEYKTPAEIIKEHPERVVVTADYSPKGLLRDKQIADALGPNIMQAVDCNYAV
QPGFLKTSTGGHYKVFTPFYRAWSECGWEHPNLRNAKGKAWEHWQECLEDGLNGYATQRD
RPDIKGTSQISHYLSLGALHPRSLLETLQQSDHIPNEDRTAFARELAFREFYADFVYHRP
ESLTKDVNPKFAQFKWNDISDDFQLWKTGHTGYPIIDAGMRQLNTTGWMHNRVRMLVASF
LTKDLLLPWQLGAEYFRDTLIDYDETINQHSWQWCAGTGTDASPYFRIFNPQTQGKRYDP
DAIYIRKWVPELAETPADNIHKLRDLPETYPKPIVDHAEARLEALARYQAL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctttaaacgctccaacaattttatggttacggcgggatctccgcgtattcgac
caccccggcttcgaagctgtcttgcaatctccaaatccccgcatcatatacagtaacgac
gccccggcctctccattccagcgccggttcctgcacgaaaccctccaggaactggcacgt
aatatacgagacttcgggttagagctggagtacaaaacacccgctgaaatcattaaggaa
caccccgaacgcgtggttgtcaccgccgactactctcccaaaggacttcttcgagacaaa
caaatcgccgacgccctgggccccaatatcatgcaagccgtggactgcaattacgctgta
caacctgggttcctaaaaaccagcacaggaggacactacaaagtattcacgcccttctat
cgcgcatggtcagaatgcgggtgggaacaccccaacctcagaaacgctaaaggcaaagcc
tgggaacactggcaagaatgcctggaagacggccttaacggctacgccacccaacgcgac
cgccccgatataaaaggcacgtcgcaaatatcccactaccttagcctcggggccctccat
ccacgcagcctcctggaaaccctccaacaaagcgaccacattcctaacgaagaccgcaca
gccttcgcccgtgaactcgcattccgcgaattctacgccgacttcgtataccaccggccg
gaaagccttaccaaagacgtgaacccaaaattcgcgcaattcaaatggaatgacatatcg
gatgacttccagctttggaaaactggccacacaggatacccgataatcgacgctggaatg
cgccaactcaataccacaggatggatgcataaccgcgtacgaatgcttgtagccagcttc
cttaccaaagatctacttttgccttggcaactcggagcagagtacttccgagacaccctt
atcgactacgacgaaaccattaatcaacactcctggcaatggtgcgctggcaccggaacc
gacgcctccccttacttccgaatctttaacccccaaacccaaggaaaacgctacgacccc
gacgcaatatatattagaaaatgggtaccagagctagcagaaaccccagcagacaatatc
cataaactacgagacctccccgaaacgtatccaaaacccattgtcgaccatgccgaagca
cggctcgaagcattggcccgctaccaggcactttaa
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