Corynebacterium freiburgense: CFREI_00565
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Entry
CFREI_00565 CDS
T09215
Symbol
dnaX1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cfg
Corynebacterium freiburgense
Pathway
cfg03030
DNA replication
cfg03430
Mismatch repair
cfg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFREI_00565 (dnaX1)
03430 Mismatch repair
CFREI_00565 (dnaX1)
03440 Homologous recombination
CFREI_00565 (dnaX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfg03032
]
CFREI_00565 (dnaX1)
03400 DNA repair and recombination proteins [BR:
cfg03400
]
CFREI_00565 (dnaX1)
Enzymes [BR:
cfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFREI_00565 (dnaX1)
DNA replication proteins [BR:
cfg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFREI_00565 (dnaX1)
DNA repair and recombination proteins [BR:
cfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFREI_00565 (dnaX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_16
AAA_30
AAA_19
AAA_14
DnaX_C
Rad17
Mg_chelatase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WJZ01423
LinkDB
All DBs
Position
108792..111059
Genome browser
AA seq
755 aa
AA seq
DB search
MALYRKYRPATFGEVVGQEHVTGPLSVALDTGRINHAYLFSGPRGCGKTSSARILARSLN
CEQGPTSTPCGVCNSCRSLAPGGPGNLDVTELDAASHNGVEDMRDLRDRAFFAPAESRYR
VFIIDEAHMISTAGSNALLKIVEEPPEHLVFIFATTEPERVIGTIRSRTHHYPFRLLTPS
AMRGLLERTCATEGIYVEDAVFPLVIRAGGGSPRDSLSVLDQLLSGAGPDGLTYDLAVPL
LGVTDDTLIDAAVDALATNDGGGLFVTVDNVIEAGLDPRRFTTDLLDRLRDLMVLQSVPD
ALALGLIDVPADRVPVLTGQAKQFPVGVLSTLAALVNDGLTDMRGATSPRLLLEILCARM
LMGQPATQTEAAFISPTSSAPATPSAPPKRVFERKSQRTVRERSEQSAPALTPALTPDKP
EAKVEAPVPQPQPAQQPVPQSPPTQVPQPKEQVHQKVEEQPIDRIRRKWARVREVVGIEN
KVAEIMLTEAKALGIRDRTLIIGHNTGALAARLNDPRNNGTIINVLKTELGYDLRVHCVV
GTDLQSAGFSPDADKPEWNPDKPAPRPQQVLREQATPPAPQVLAPQPEPTETPQQPTSVW
NEPAKLGGSSEESQHSDERAAPAVAPSSRYPAAHSPKPAVEEPRKPKRWEEAVARGNERL
KNNPTFSDGVPLPPEPDDPYDLPPEEEVPSPPPPASPLESAPEPSTSGSPQVSAREQEEA
DMVRQASSEPGSHDHRDARAVAMEMLERELGARPL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtggctctttatcgcaaataccgtcctgcaacgtttggtgaggttgttggccaggaacat
gttactggaccgctctcggtggcattggatactggccgtattaatcatgcgtacttgttt
tctggccctcggggttgtggtaaaacttcttcggctcgaattcttgcgcgttcgttaaat
tgcgaacaaggccctacttctactccctgcggggtgtgtaattcatgccgcagtcttgca
ccaggtggccccggaaatttggatgttacggagcttgatgcggcgagccacaatggtgtt
gaggatatgcgtgacctgcgtgatcgtgcgttttttgcccctgcggagtcgcgctatcgc
gtgtttattatcgacgaagcccacatgatcagtacggcaggttcaaatgcgttgttaaag
attgtggaggaaccgccagagcatttggtatttatttttgccaccacggagccagaacgt
gtgatcggtacgattcgttcacgcacgcatcattatcctttccgtcttcttacgccttcg
gcgatgcgtggtttattggagcgtacttgtgccactgagggtatttatgttgaagatgcc
gtatttccgcttgttattcgtgcaggcggcgggtctcctcgggattctttgtcagttttg
gatcagttgttgtcaggtgccgggcctgacggattgacctatgaccttgcggtgccatta
ttgggagtcacagacgatacgcttatcgacgccgcagttgatgcacttgccacaaatgat
gggggtgggctgttcgtaacggtggataacgttattgaggctgggctagatcctcgcagg
tttaccactgatttattggatcggttgcgggaccttatggtgttgcaatcagttccggat
gcgcttgctcttggattgattgatgttcctgcggatcgtgtccctgttttgactggtcag
gcaaagcaatttccggtgggagttttaagcacattggccgctttggtgaatgatggcttg
actgatatgcgtggtgcgacaagccctcgtttacttttggagattttgtgcgcacgcatg
ttgatgggacagcctgccactcaaactgaggcagcgtttatatcacctacatctagtgct
cctgccaccccaagtgctcctcctaagcgtgtttttgagcggaaatctcaaaggactgtg
cgggagcgttcagagcagtctgccccagcattaacccctgctttaactccagataaacct
gaagctaaggttgaggcccctgtgcctcaacctcaaccagcgcagcaaccagtgcctcaa
tctccaccaacacaggttccgcaacctaaagagcaggtacatcagaaggttgaggagcaa
cctatcgatcggattcggcgtaagtgggcacgggttcgtgaggttgttggcatagaaaat
aaagttgcggagattatgcttactgaggcgaaagcactgggtatccgtgatcgaacgctg
attattgggcataatacgggtgcgttggcggcgcgactcaatgatcctcgcaacaatggg
acgattattaatgttttaaaaactgagcttgggtacgatctgcgggtccattgtgtggtc
ggtacggatcttcagtctgctggttttagccccgatgctgataagcctgaatggaatcca
gacaagccagcaccgaggccacaacaggttttacgggaacaagctactccaccagcacca
caagtactagcaccacaacccgagccaacagagacgccgcagcaacccacttcggtttgg
aatgagcctgcgaagttgggcgggtcttcggaggaatcacagcattctgatgagcgggct
gcacctgctgttgcgccctcttcgagatatcccgctgctcattccccaaagcctgcggtg
gaggagcctcgtaagcctaaacggtgggaggaggctgtggcacgcggtaatgagcggtta
aaaaataatccgacattttctgacggtgtcccattgccgcctgagccggatgatccctat
gatcttcccccggaagaggaggtgccatcacctccaccgcccgcgtcgcctctggagtct
gcaccggagccctctacttcaggttcaccacaggtttctgctcgtgaacaggaggaagcg
gatatggtgcggcaggcgagttcggagccgggatcgcatgatcatcgggatgcgcgcgcc
gttgctatggaaatgttagagcgtgagcttggggctcggccattgtaa
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