Corynebacterium freiburgense: CFREI_00915
Help
Entry
CFREI_00915 CDS
T09215
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cfg
Corynebacterium freiburgense
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfg03032
]
CFREI_00915 (topA)
03400 DNA repair and recombination proteins [BR:
cfg03400
]
CFREI_00915 (topA)
Enzymes [BR:
cfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CFREI_00915 (topA)
DNA replication proteins [BR:
cfg03032
]
Prokaryotic type
DNA Topoisomerases
CFREI_00915 (topA)
DNA repair and recombination proteins [BR:
cfg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFREI_00915 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WJZ01492
LinkDB
All DBs
Position
186803..189748
Genome browser
AA seq
981 aa
AA seq
DB search
MATAKKRLVIVESATKAKKIAPYLGGDYIVEASVGHIRDLPRGAADVPAKYKKEQWARLG
VDTEHGFAPLYVVSPDKKKKVTDLKSKLKEVDELYLATDPDREGEAIAWHLLEVLKPKVP
ARRMVFNEITKPAILAAAENTRELDKNLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSA
GRVQSVATRVIVERERERMAFVPAEYWDLTAALDTGAADGDNPRRFQARLTAIDGARVAV
GRDFNDRGELVSKAKVLHVAAARKLADALEGATMTVAAVEEKPYTRKPYAPFMTSTLQQE
AGRKLHYTSERTMRIAQRLYENGHITYMRTDSTTLSESGIRAARAQAKELYGADYVSETP
RQYNRKVKNSQEAHEAIRPAGETFSTPGQLHAALDAEEFKLYELIWQRTVASQMADARGT
SMKVTIHGSATTGEQCEFSATGRTITFPGFLKAYVETTRQADGQDLADNAEKRLPRLTQG
DNLTAHEIKADGHTTNPPARYTEASLVKKMEDLGIGRPSTYASIIRTIQDRGYVYSRGNA
LVPTWVAFAVVGLLEQNFASLVDYDFTSSMEDELDDIATGNEDRTAWLTGFYFGNADAST
AMAETVARLGGLKALVGDNLEQIDARTVNSLHLFDDAEGRPILVRVGRYGPYLERAVGVD
KNGEIEHQRANLSDTMTPDELTLEVAEKLFATPQGGRELGLNPKNGRMIVAKEGRYGPYV
TELITDEERASTGKIAEQIVADERAAEDAQRAAEGKRAKNWETKTAIAAKEKRINQIIEE
TLKPKTASLFSTMEPGTVTLDEALQLLTLPRELGNDPNDGQPITAQNGRYGPYLKKGNDS
RSLANENQIFTITLEEASRIYTEPKRRGNTPSQPPLKTLGNNDVSGKPMVVKEGRFGAYV
TDGVTNASLRKGDTPETMTDARACELLSERRAKEAANPSPAKKTRAKKAGAKKAVAKKAV
AKKAGAKKAAAKKTVAKKTAG
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
gtggctacagcgaagaaacgccttgtgattgtcgagtcggcaacaaaggcgaaaaaaatc
gcgccttatttggggggcgattacatagttgaagcatcggtgggtcatattcgtgacctt
cccagaggcgcagccgatgtgcccgcaaaatacaaaaaagagcagtgggcacgccttggt
gtggataccgagcatggtttcgcgcctctctatgtggtgagtccagataagaagaagaaa
gttacggaccttaagtccaaactcaaggaagttgacgagctatatctggccacagacccg
gaccgtgagggtgaggctattgcctggcatttgcttgaggtattaaagccgaaggttcca
gctcgccgcatggtgtttaatgaaattaccaagcctgcgattctggctgctgcggaaaat
acccgcgagttagataaaaaccttgttgatgcccaggaaacccgccggattctggaccgt
ctttacggttatgaggtttccccggtgctgtggaaaaaggtaatgccgcgcctttcggct
ggtcgtgtgcagtcggtggctacgcgcgtgattgtggagcgtgaacgagagcgcatggcg
tttgtccctgccgagtattgggatttaactgccgctttggatactggtgccgctgacggc
gataatcctcgccgtttccaagcaaggcttacggctattgatggtgcccgtgttgcagtg
ggccgtgacttcaatgatcgtggtgagttagtgtccaaggccaaggtgcttcatgtggca
gccgcccgtaagcttgccgacgccctggaaggcgccactatgaccgtggccgctgttgaa
gaaaagccatacacccgcaagccctatgccccctttatgacctcgacgctccagcaggag
gccgggcgtaaactgcattacacgtctgagcgcactatgcgtattgctcagcggctctac
gaaaacggccatattacctatatgcgtacggattccacgactctttctgaatcaggtatt
cgcgcagcccgtgctcaggcgaaagagttgtatggcgctgactatgtttctgaaaccccg
cgccagtacaaccgcaaggtcaagaattcccaggaagctcacgaagccatccgcccagcc
ggcgaaacattttcgacgcccggtcagctccacgccgccctcgacgctgaggaattcaaa
ctctatgaattgatttggcagcgtactgtggcatcccaaatggctgatgcccgtggaact
tccatgaaagttacaattcacggttcggcaaccaccggtgagcaatgtgaattctctgct
actggccgcaccatcacttttccgggattcctcaaggcatatgtggaaactacccgacag
gctgacggccaagaccttgccgacaatgccgaaaaacggctccctaggcttactcagggc
gataacctcactgcccatgaaatcaaggccgatggacacaccactaacccgccagcgcgc
tatacggaagccagcctggtgaaaaaaatggaagatctcggcattggccgcccttccacc
tacgcttccattatccgcactatccaagaccgcggatatgtctattcccgaggcaatgct
ctcgtacccacatgggttgcctttgccgtcgtcggactcctggagcaaaactttgcatcc
ctcgtggactacgacttcacctcctccatggaagacgaactggacgacatcgccaccggc
aatgaagaccgcactgcctggctgacaggcttctacttcggcaacgccgacgcctctaca
gcaatggcagagacagtcgcacgtctcggcggactaaaagccctcgtcggagacaatctc
gaacaaatcgacgcccgaactgtcaattcactccaccttttcgacgacgccgagggccgc
ccaatccttgttcgtgtaggccgttatggtccgtaccttgagcgggctgtgggcgtcgat
aagaacggagaaatagaacaccagcgcgcaaacctgtcggacacaatgactcccgacgaa
ctaaccctcgaagtcgccgaaaaactctttgccaccccccaaggcggccgcgaacttggt
cttaaccccaaaaacggccgcatgatcgtagcaaaagaaggccgctacgggccctacgtt
acagaactcattaccgacgaagaacgcgcaagcaccggcaaaatcgccgaacaaatcgtc
gccgacgaacgagccgccgaagatgcacaacgcgccgccgagggcaaacgagccaaaaac
tgggaaaccaaaacagccattgcggcaaaagaaaaacgaatcaaccagataatcgaagaa
acactcaagcccaaaactgcctcgctctttagcacgatggaacccggtaccgtcaccctc
gacgaagccctccaactgctcaccctcccgcgggaactgggcaatgaccccaacgacggt
caacccatcaccgcgcaaaacggccggtatggcccctacctgaaaaaaggcaatgactcc
aggtccctggcgaatgaaaaccaaatcttcaccatcaccctggaagaagcaagccgcatt
tacacagaaccgaaacgccgcggcaataccccaagccaacctccgcttaaaacccttgga
aataatgatgtctccggaaaaccaatggttgttaaggaaggcagatttggcgcatatgtt
accgatggtgtcaccaacgcatccctgagaaaaggcgacactcccgaaactatgaccgat
gcacgggcatgtgaactcctgtctgagcgaagggcgaaagaggcagctaacccaagccca
gctaagaaaacacgtgcgaagaaggctggggcgaaaaaggctgttgctaagaaagctgtt
gctaagaaagcgggagcgaaaaaagctgcggcgaaaaagaccgtggccaagaagacagct
ggatag
DBGET
integrated database retrieval system
