Corynebacterium freiburgense: CFREI_03510
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Entry
CFREI_03510 CDS
T09215
Name
(GenBank) Type III restriction enzyme, res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cfg
Corynebacterium freiburgense
Pathway
cfg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CFREI_03510
09124 Replication and repair
03420 Nucleotide excision repair
CFREI_03510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfg03021
]
CFREI_03510
03400 DNA repair and recombination proteins [BR:
cfg03400
]
CFREI_03510
Enzymes [BR:
cfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFREI_03510
Transcription machinery [BR:
cfg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CFREI_03510
DNA repair and recombination proteins [BR:
cfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CFREI_03510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
SRP_SPB
Motif
Other DBs
NCBI-ProteinID:
WJZ02002
LinkDB
All DBs
Position
complement(737707..739374)
Genome browser
AA seq
555 aa
AA seq
DB search
MSFGDGPLIVQSDKTVLLEVDHPLGDEARAALAPFAELERAPEHVHTYRITPLALWNARA
AGHDAEQVVDVLERYSRFPVPQPLLIDVAETMARYGRVRLHKHPAHGLILESSETAILTE
ITLHKKIKPMLGQVIDSETVVVHPSERGRLKQELFKIGWPAEDLAGYVDGEAHPIALSQD
QETWELRDYQRRAADSFWQGGSGVVVLPCGAGKTMVGAAAMAKAQTTTLILVTNTVAGRQ
WRSELLRRTSLTEDEIGEYSGEKKEIRPVTIATYQVMVRKTKGEYRALELFDNHDWGLII
YDEVHLLPAPVFRMTSDLQSRRRLGLTATLIREDGCEGDVFSLIGPKRYDAPWKDLENQG
FIATADCVEIRTTMTDAERRAYSLADSREHYRLAACAATKMPVVRKLLEMHAGQPTLIIG
AYLDQLEQIGTELGVPVIEGKTPTRLREKLFSAFRRGEINVLVVSKVANFSIDLPEAAVA
IQVSGTFGSRQEEAQRLGRLLRPKADGGQAHFYSVVSRDTKDTLYAAHRQRFLAEQGYAY
RILDAIDILRPMKEN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctttggagatggaccacttattgtccaatccgataaaactgtcttgctagaggtg
gatcatccgcttggcgacgaagcccgcgccgccctagctcccttcgccgagctcgaacgc
gcacccgaacatgtgcatacctatcggattactcccctagcattgtggaacgcccgcgca
gctggccacgacgcagaacaagtagtcgatgtattagagcgttattcgcgctttccggtt
ccacaaccattgcttatcgacgtcgccgaaactatggcacgctatggacgcgtacgttta
cacaaacaccccgcccacgggttgatcttggaatccagtgaaaccgccattctgactgaa
attaccttgcataagaaaatcaaacctatgttggggcaggtaattgattcggaaaccgta
gtagtgcacccatcagaacgtggacggcttaagcaagagttatttaaaatcggctggcca
gccgaggacttagccggatatgttgatggtgaggcccatccaattgcgctttcgcaagac
caagaaacctgggagcttcgggattatcagcgacgcgcggcagactccttttggcagggc
ggctctggagttgtggtgcttccatgtggtgccggaaaaactatggttggggcggcagcg
atggcaaaagcccaaaccaccactctgattttggtaaccaatacggttgctgggcggcaa
tggcgctcggaattacttcgccgcacttcactaaccgaagatgaaatcggcgaatactct
ggtgaaaagaaggaaatccgtccagtaactattgccacctatcaggtaatggtgcggaaa
accaagggcgaatatcgggcgcttgaactctttgataatcacgattggggcctgattatc
tatgatgaagtccacctcctgcccgcgccggttttccgtatgacctctgatttgcagtcc
cgacgccgccttggacttaccgccacattaatccgtgaagatggctgtgagggcgatgtg
ttttccttaatcgggccgaagcgttatgacgctccctggaaggacctggaaaaccaaggg
tttattgctactgcggattgcgtggaaatccgcaccactatgaccgatgcggaacgtcga
gcctattcacttgccgattcccgcgaacactaccggcttgccgcctgcgcggccacgaaa
atgcctgtggtgcggaagcttttggaaatgcacgctggacaacccacccttattattggc
gcgtatttggaccaattagaacaaataggcactgagcttggagttccggtcattgaaggg
aaaaccccaaccagactccgggaaaaactctttagtgcatttcgacgcggcgagataaat
gtcttggtagtaagtaaagtggcaaacttttctattgacctcccggaagccgcagtggcc
atccaagtttccggaacctttggatcgcggcaagaagaagcgcaacgccttggccgattg
ctgcgtcccaaggctgatggtggtcaagcacatttctattccgtggtgagtcgggatact
aaagacacattgtatgccgcacaccgacaacgctttcttgccgaacagggttacgcatac
cgaatcctcgacgcaatagatatcctccgacccatgaaagaaaactaa
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