Corynebacterium freiburgense: CFREI_07860
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Entry
CFREI_07860 CDS
T09215
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cfg
Corynebacterium freiburgense
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfg03016
]
CFREI_07860 (rnd)
Enzymes [BR:
cfg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CFREI_07860 (rnd)
Transfer RNA biogenesis [BR:
cfg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CFREI_07860 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WJZ02850
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Position
1684899..1686146
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AA seq
415 aa
AA seq
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MPSPLHFPADGIPNVFSSNNEFAIAAELLSHGIGPVAIDTERANSFRSDDRAFLIQLRRR
GVGTLLLAPEHHREELTFHLAPVLNTLEWILHAAPSDLPSLHALGLYPASIIDTEKAAKL
AGFPQPSLGQLTKDILGLELAKGHGRENWSITPLPEDWVIYAALDVEQLIELSEALIEIL
DQQNKLAWAEEEFEYLKNLTVPTQDPATGRAEPIPLPHAHWRTLKGIGALRSPEQLAIAR
ALWKTRNQICQKHDIAPNQVLKNKNLIAIAQQCATTPEEIAKILRQSYIDKHTRRWSKIA
RNALASSKASWPKPKTPPKPEFPPSKYWTEHYPHVTEWYQRARNALQALARRVNTPLECI
IHVSTVKEIAWECAAVRGEYHAAYIAHILEKHQARAWQVDLIIAALSEEFSPTTR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtccgctgcacttccctgctgatggaattccaaacgttttttcaagcaataat
gaatttgccattgctgctgagttgctttcgcatggtattggtccggtagctattgatacg
gaacgcgcaaattctttccgttctgatgaccgcgcctttcttatccagctgcggcgtcgg
ggcgtcggcacgttgctactcgcgccggaacatcaccgcgaggaacttacgtttcattta
gcacccgtacttaatacattggagtggattttgcatgcggcaccatccgatttgccatca
ctccatgcactggggctgtatccagcaagcattattgataccgaaaaagccgccaagctt
gctggtttcccgcaaccgagtttgggtcaactgaccaaagatattcttggtttggaactt
gccaagggacatggacgtgagaactggtcgatcactccccttcccgaagattgggttatt
tatgctgcactggacgttgaacagctcattgaacttagcgaagcgctcattgaaattctg
gaccagcaaaacaaattagcctgggccgaagaggaattcgagtatttgaaaaaccttacg
gtccctactcaggaccccgctaccggtcgggcagaaccgattccgctaccgcacgcacat
tggcgaactttaaaaggaataggggcattacgctctccggaacagcttgctattgcccga
gcgttatggaaaacccgcaatcaaatctgccaaaaacacgatattgcgccaaatcaggta
ttaaaaaacaaaaaccttattgcgatcgcacagcaatgtgccacaactccggaagaaatc
gccaagattttacgccaatcgtatattgataaacacacacggcggtggagcaagatagcg
cgaaatgcccttgcttcttccaaagcttcatggccgaaaccaaaaacccctccgaaaccg
gaatttcccccaagtaaatattggaccgagcattacccgcatgttactgagtggtatcaa
cgtgcccgaaatgctctgcaagcactcgcacgccgagttaatacaccccttgaatgcatt
attcatgtatcaacggtcaaagaaatcgcatgggagtgtgctgctgttcgcggtgaatac
cacgctgcttatattgcacacatcctggaaaagcaccaagcccgcgcatggcaggtcgat
ttgattattgcggctttaagcgaagagttttcgccaacaacacgatag
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