Corynebacterium freiburgense: CFREI_08120
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Entry
CFREI_08120 CDS
T09215
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cfg
Corynebacterium freiburgense
Pathway
cfg00300
Lysine biosynthesis
cfg00470
D-Amino acid metabolism
cfg01100
Metabolic pathways
cfg01110
Biosynthesis of secondary metabolites
cfg01120
Microbial metabolism in diverse environments
cfg01230
Biosynthesis of amino acids
Module
cfg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CFREI_08120 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFREI_08120 (dapF)
Enzymes [BR:
cfg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CFREI_08120 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WJZ02902
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Position
complement(1743757..1744605)
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AA seq
282 aa
AA seq
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MISFAKGHGTENDFIILPDPDVLLDLSTEFVSQLCDRRAGIGADGVLRIARTGDLIARGV
IAPIPGVQDEDWFMDYRNADGSVAEMCGNGVRVFAHWLYSRSLVQDSEFRVGTRAGVRPV
TVHSASDTDAMVSVGMGTPVVTGISTCRVGDYAFAGLAVDMGNPHLACVVPELTQEQLAL
LPIEQSFEFDTDFFPHGVNIEVLTPLHEGQVSMRVHERGSGETRSCGTGTVAAARAALAD
QGIENGTIDVHVPGGKVSVTIDGDESTLTGPSKIIAVGELQF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgatttcctttgcaaaaggccatggcactgaaaacgactttattatccttcctgacccc
gatgttttgctcgatttatcgacagagtttgtatcccagctttgcgatcgtcgggcgggt
atcggtgctgatggtgttttgcgcattgcccgtactggggacttaattgcacgtggtgtt
attgcaccgattcctggtgttcaggatgaagattggtttatggattaccgcaatgccgat
ggttcagtagcggaaatgtgtggcaatggtgtacgagtatttgcccattggttgtattca
aggtctttggtacaggattctgagtttcgggtaggcacccgtgctggtgtccgcccagtg
actgtacattccgcaagcgatactgacgccatggtcagtgttggtatgggtaccccagtg
gttactggtatttctacttgtcgtgttggggattacgcttttgctggtcttgcggttgat
atgggaaacccgcatcttgcatgtgtggtgcccgagcttacccaggagcaattggcgctt
ttacctattgagcaatcatttgagtttgatactgattttttcccacatggcgtcaatatt
gaggtacttacaccactgcacgagggtcaggtttctatgcgagttcatgaacgaggttcc
ggggagactcggtcatgcggtactggtactgttgcagcggcccgagcagcgctggctgac
cagggtattgaaaatggcacgattgatgtgcatgttcctggtggcaaggtcagtgtgact
attgatggggatgagtccacgctgaccggcccgtcaaagattattgctgtaggtgagttg
cagttttag
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