Corynebacterium freiburgense: CFREI_08285
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Entry
CFREI_08285 CDS
T09215
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cfg
Corynebacterium freiburgense
Pathway
cfg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFREI_08285 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfg03019
]
CFREI_08285 (pnp)
03016 Transfer RNA biogenesis [BR:
cfg03016
]
CFREI_08285 (pnp)
Enzymes [BR:
cfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CFREI_08285 (pnp)
Messenger RNA biogenesis [BR:
cfg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFREI_08285 (pnp)
Transfer RNA biogenesis [BR:
cfg03016
]
Prokaryotic type
tRNA degradation factors
CFREI_08285 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_2
Methyltransf_7
KH_KhpA-B
Coatomer_g_Cpla
Motif
Other DBs
NCBI-ProteinID:
WJZ02935
LinkDB
All DBs
Position
complement(1775580..1777814)
Genome browser
AA seq
744 aa
AA seq
DB search
MSDVTIAKDPEYGIVEATAIIDNGDFGTRTIRLETGQLARQADGSVTAYLDEGTMMLATT
TASNQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILASRLIDRPLRPTFV
KGLRNEVQVIVTVMSMDPKDMYDVVAINAASAATQLSGLPVSGPVGGVRMALIADEKHPE
GQWVAFPTHEQQAVALFEIVVAGRIVAKKKGRKTINDVAIMMVEAGATETVVDRIEKGAP
APTEKVVAEGLEAAKPFIEVLCRAQIGLAKEAAKETQEFPLFPPYTDEIYAAVEKKAANK
LEKLLTIKNKQEREEATNEHMEAIEESLLGRFEEQGKEIRAAYNALMKAIVRRRILTDHF
RIDGRGITDIRDLGVEVDLIPRAHGSSLFERGETQILGVTTLDMLKMEQQIDSLTPVNHK
RYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALTPVIPSREVFPYTIRQVSEALGS
NGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSDEVNGETRYVALTDILGAEDAFGD
MDFKVAGTADFITALQLDTKLDGIPSSVLADALSQARDARLAILETMAEVIDSPDEMSSL
APRITTVNVPVSKIGEVIGPKGKTINSITEETGANITIEEDGTVYIAATSGEAADAAIEK
INSIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRIDKVEDVVNV
GEKIQVEIADIDNRGKISLVPVED
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgtaactattgccaaagatcccgaatacggcattgttgaagcaactgcaatt
attgataatggtgattttggcactcgcacaatccgtttggaaaccggtcagcttgcccgc
caagcagatggttctgtaactgcgtatttggatgaaggcacaatgatgctggcaaccacc
acagcatcaaaccaaccacgtgaagggtttgatttctttcccctgaccgtggatgttgaa
gagcgcatgtacgctgctggccgtattccagggtcgtttttccgccgtgaaggccgtcca
tccactgaggcgatcctagcgtcgaggcttattgaccggccactgcgcccaacttttgtt
aagggcttgcgtaatgaggtgcaggttattgtcaccgttatgtccatggatccaaaggac
atgtatgacgtagttgcaattaatgctgcttcggccgctacgcagctttccggtttgccg
gtttccgggccggttggtggtgttcgaatggccctgattgctgatgaaaagcacccggag
ggacaatgggtggcattcccaacacatgaacaacaagcggtggccctttttgaaattgtt
gttgccggacgcattgtggctaagaagaaaggccgcaaaaccattaatgatgttgcaatt
atgatggttgaagctggtgccactgaaactgttgtagatcgaattgaaaaaggcgcacct
gccccaactgaaaaagttgtggctgaaggtttagaagcagcaaagccctttattgaggta
ctttgtcgtgcacaaattggtctagcaaaagaagcggcaaaagaaacccaggaattcccg
cttttccctccgtatactgatgaaatttatgctgcggtggaaaagaaagcggcaaataag
ctggaaaaactgctcacaattaaaaataagcaggaacgggaggaagccaccaatgagcat
atggaggcaatcgaagaaagcttgcttgggcgctttgaggaacaaggcaaggaaattcgc
gcagcatacaatgcattaatgaaggcgattgtgcgccgccgtatccttacagatcatttc
cgtatcgacggccgcggcatcaccgatatccgtgaccttggcgttgaagttgatttaatc
ccacgcgcacacggttcctctctctttgagcgtggcgagactcaaattttgggtgtgacc
accctggatatgctgaagatggaacagcagattgattcgcttactccggtaaatcacaag
cgctatatccaccattacaacttcccaccgtattccaccggcgaaactggccgtgttggc
tccccgaagcgccgcgaaatcggccatggtgcgctagccgaacgtgcactcacaccggta
atcccatcccgtgaagtatttccatatacaatccgtcaggtctctgaggcacttggttcc
aatgggtctacctctatgggttccgtatgtgcttccacattgtccctgtacaatgcgggt
gttccgctcaaggcgccagtagctggcattgctatggggcttgtttcagatgaagtcaat
ggcgaaacccgctatgttgcccttaccgatatcctcggtgccgaagatgctttcggtgat
atggactttaaggtagctggtaccgcagactttattactgcactgcagctggataccaag
cttgacggtatcccgtcatcagtgcttgccgacgccctgtcccaggcccgcgatgcacgc
ctcgcgatcctcgaaacaatggctgaagtgattgatagcccagatgagatgagctcgctt
gctcctcggatcaccaccgtaaatgtcccggtaagcaagatcggtgaggttattggtcct
aaaggcaagaccattaattccattacggaagaaactggtgccaatatcacgatcgaagaa
gatggcaccgtctatattgctgctacaagtggcgaagccgctgacgccgcgattgaaaag
atcaattccattgctaacccgcaactaccaaaggtaggcgaacgtttcctaggcaccgtg
gttaagaccactgccttcggtgcttttgtttccttattgccaggtcgggatggacttgta
cacatttcaaagcttggaaacggcaagcgcattgacaaggtcgaagatgtagttaatgtc
ggcgagaagatccaagttgaaattgcagatattgataatcgcggcaagatttcactggtg
cctgttgaagactaa
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