Corynebacterium freiburgense: CFREI_08365
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Entry
CFREI_08365 CDS
T09215
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cfg
Corynebacterium freiburgense
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfg03016
]
CFREI_08365 (truB)
Enzymes [BR:
cfg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CFREI_08365 (truB)
Transfer RNA biogenesis [BR:
cfg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFREI_08365 (truB)
Prokaryotic type
CFREI_08365 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WJZ02951
LinkDB
All DBs
Position
1793516..1794409
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AA seq
297 aa
AA seq
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MNDPLSSSGIVIVDKPAGMTSHDIVARLRRIFSTRRVGHAGTLDPMATGVLVVGIERGTK
FLAHMVAETKTYRATIRLGMSTSTDDAEGETLTQTSAISLTDAAIDAEIQKLTGNIMQRP
SAVSAIKIAGKRAYERVRAGEKVDIPARPVTVHRFDVLGRKRSGDFYDLDVEIHCSSGTY
IRSLARDLGAVLGVGGHLISLRRTAVGPFTLEHAQSLEALQDHPKMSLTLDAALQTTHPV
LPITEEEGRNLAMGKWLEPKGIRGIHAAITPDGKAIALVKEQGKRLSTVFVARPSTL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccccctctcttcttctggcattgtcattgtggataagcccgccggcatgaca
tcccacgatattgttgctcggctgcggcggatattttccacccgtcgtgtgggccatgcg
ggcacgctcgatccaatggctaccggggtattagttgtggggattgaacggggcacaaag
ttcctcgcacatatggttgctgaaaccaaaacctaccgcgcaacaattcgactaggtatg
tccacaagtaccgatgatgctgaaggcgaaacgctgacccaaacttccgcgatttcgctt
accgacgccgcgatcgacgctgaaatacaaaagctcaccggcaatattatgcaacgcccc
agcgctgtaagcgccattaaaattgctggcaaacgcgcatatgaacgtgttcgagccggc
gaaaaagtggatattcccgcacgcccggtaacagttcaccgattcgatgtattaggccgc
aaacgttccggggacttttatgatctagatgtagaaatccactgctcatctggaacatac
attcggtcattggcccgagatctgggtgctgtattaggcgttggcggtcaccttatatca
ctacgccgtactgcagtaggcccattcaccctcgaacatgcgcaaagcctggaagcttta
caggatcatccgaaaatgtccttaacactcgatgcagcattacaaaccacccatcccgta
ctacctattaccgaagaagaaggtcgtaaccttgcaatgggtaaatggcttgaaccaaag
ggaatacgcggcatccatgccgctataacccccgacggcaaagcaatcgccctagtcaaa
gaacaaggaaaacggctttcaactgtctttgtggcacggccctcaacactgtaa
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