Corynebacterium freiburgense: CFREI_10900
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Entry
CFREI_10900 CDS
T09215
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cfg
Corynebacterium freiburgense
Pathway
cfg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CFREI_10900 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfg03019
]
CFREI_10900 (orn)
03009 Ribosome biogenesis [BR:
cfg03009
]
CFREI_10900 (orn)
Messenger RNA biogenesis [BR:
cfg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFREI_10900 (orn)
Ribosome biogenesis [BR:
cfg03009
]
Eukaryotic type
Pre-60S particles
RNases
CFREI_10900 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WJZ03451
LinkDB
All DBs
Position
2354956..2355588
Genome browser
AA seq
210 aa
AA seq
DB search
MSSEITAKNDRLVWIDLEMTGLDPERHVIVEVAAIITDAKLNIISEGIDLVVHATEEELR
EMDGFVTEMHLNSGLVDEIRESNTTLQDAENAVVALVEKHCEPQPLLAGNSIATDRSFIR
HHMPRLDAALHYRMIDVSSIKELARRWYPRAYYNQPTKGMAHRALADIVESIRELDYYRR
SIFTPTPGLTTDQALQASRDATHTYQQFLQ
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggaaatcaccgcaaaaaacgatcgcctggtatggatcgatctggaaatgacc
ggcctggacccggaacgccacgtaattgtagaagtcgccgccataattaccgacgccaaa
ctcaatatcattagcgaaggcatagaccttgtagttcacgccaccgaagaagaactacga
gaaatggatggctttgttacggaaatgcacctaaatagcggactcgtagatgaaatccgc
gaatccaataccaccctgcaggatgccgaaaacgccgtggtcgcgctcgtcgaaaagcac
tgcgaaccccaacccctgcttgccggaaattccattgccaccgatcgctcatttatacgc
caccatatgccgcgtctcgacgccgcgctgcactaccgaatgatcgacgtttccagcatt
aaagaactcgcccgccgctggtacccgcgcgcctattacaaccaaccaaccaaaggtatg
gcacaccgggcgctcgccgatattgtcgaatcaatacgcgaactcgactactaccggcgc
agcatctttacccccacccccgggctcaccaccgaccaagcactccaagcatcccgcgat
gccacccacacctaccagcagtttttgcaataa
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