Corynebacterium freiburgense: CFREI_12235
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Entry
CFREI_12235 CDS
T09215
Symbol
groL2
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cfg
Corynebacterium freiburgense
Pathway
cfg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFREI_12235 (groL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfg03019
]
CFREI_12235 (groL2)
03110 Chaperones and folding catalysts [BR:
cfg03110
]
CFREI_12235 (groL2)
03029 Mitochondrial biogenesis [BR:
cfg03029
]
CFREI_12235 (groL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfg04147
]
CFREI_12235 (groL2)
Enzymes [BR:
cfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CFREI_12235 (groL2)
Messenger RNA biogenesis [BR:
cfg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CFREI_12235 (groL2)
Chaperones and folding catalysts [BR:
cfg03110
]
Heat shock proteins
HSP60 / Chaperonin
CFREI_12235 (groL2)
Mitochondrial biogenesis [BR:
cfg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CFREI_12235 (groL2)
Exosome [BR:
cfg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CFREI_12235 (groL2)
Exosomal proteins of other body fluids (saliva and urine)
CFREI_12235 (groL2)
Exosomal proteins of breast cancer cells
CFREI_12235 (groL2)
Exosomal proteins of colorectal cancer cells
CFREI_12235 (groL2)
Exosomal proteins of bladder cancer cells
CFREI_12235 (groL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WJZ03704
LinkDB
All DBs
Position
complement(2623519..2625162)
Genome browser
AA seq
547 aa
AA seq
DB search
MAKIIAFDEEARRGLEKGLNTLADAVKVTLGPKGRNVVLEKSWGAPTITNDGVSIAREIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGSNPMGIKRGIE
KAVAKVTDQLLSSAKEIETEEEIAATAGISAGDPAIGAKIAEAMYAVGGGKLNKESVITV
EESNTFGVELEVTEGMRFDKGYISGYFATDMERQEAVLEDPYILLVSSKISNIKELLPLL
EKVMQTGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAQLQDMAILTG
GQVISEEVGLSLETADLPLLGRARKVVVTKDDTTIVEGAGDAKQIEGRVNQIRAEIENSD
SEYDREKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGV
ALLQAAHVLDGDLDLHGDEATGVKIVRTALSAPLKQIAVNAGYEAGVVADKVASLPAGEG
LNAATGEYVDLMAAGINDPVKVTRSALQNAASIAALFLTTEVVVADKPQPANAGVPGADE
MGGMGGF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcatcgcattcgatgaagaagcacgccgcggcctggaaaagggcctgaat
accttggctgacgcagtcaaggttacgctcggcccaaagggccgtaacgtagtcctggaa
aagtcctggggcgccccgaccatcaccaacgacggtgtttctatcgctcgcgagatcgag
cttgaagacccgtacgaaaagattggtgctgagctagtcaaggaagtggcaaagaagact
gacgacgtcgcaggtgatggcaccacgacggcaaccgtgctagcacaggccctggttcgc
gaaggcttgcgcaatgttgcagctggctcaaacccaatgggcattaagcggggcattgaa
aaggcggtagcaaaagtcaccgatcagttgctttcctctgcaaaagaaattgaaaccgaa
gaagaaatcgcagcaaccgctggtatttccgctggtgatccagcaatcggtgcgaaaatt
gcagaggcaatgtacgcagttggcggcggcaagctcaataaagagtccgttattaccgtt
gaagaatcaaacaccttcggtgtagaactcgaagtcaccgagggtatgcgctttgataaa
ggctatatttcgggctacttcgctaccgatatggagcgccaagaagccgttcttgaagat
ccatatatcttgttggtgtcctccaagatctccaatatcaaagaactgcttccactattg
gaaaaggttatgcagaccggcaagccactgctgattatcgccgaagacgttgaaggcgaa
gccttgtcaacgctggtagtgaataagattcgtggcacctttaagtctgttgcagtaaag
gctcctggtttcggcgatcgccgtaaagcacaattgcaggatatggcaatccttacgggt
ggtcaggttatttccgaggaagttggactctccctggaaactgcagacctgccactgctc
ggccgcgcacgtaaggtagttgtcacgaaagacgacaccaccatcgttgaaggtgcaggc
gacgcaaagcagatcgaaggtcgtgtaaatcaaatccgtgcagagatcgaaaattctgat
tcggaatacgaccgcgaaaaacttcaggagcgtctagcaaagctggctggcggtgttgcc
gtaatcaaggtaggcgcagctaccgaggttgagctaaaagaacgcaagcaccgcattgaa
gacgccgtgcgaaacgcaaaggcggccgttgaagagggcattgttgcaggcggtggtgtt
gcacttctgcaagctgctcacgtactcgacggtgaccttgacctccacggtgatgaagca
acaggtgtcaagatcgttcgcaccgcactttctgctccactgaagcaaattgcagtgaat
gctggctacgaagctggtgtggtagcagacaaagttgcatcgctgcctgctggtgagggg
cttaacgctgcgactggcgagtatgtagacctgatggccgcaggtattaatgacccggtt
aaggtgactcgttccgcattgcagaacgctgcctccatcgctgcgctcttccttaccact
gaggtggttgtagctgacaagccgcagccagcaaacgctggtgttccaggcgccgatgaa
atgggtggtatgggcggtttctaa
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