Corynebacterium freiburgense: CFREI_13035
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Entry
CFREI_13035 CDS
T09215
Symbol
ppsA
Name
(GenBank) Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA
KO
K12437
polyketide synthase 13
Organism
cfg
Corynebacterium freiburgense
Pathway
cfg00074
Mycolic acid biosynthesis
cfg01100
Metabolic pathways
cfg01110
Biosynthesis of secondary metabolites
Module
cfg_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
CFREI_13035 (ppsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cfg01004
]
CFREI_13035 (ppsA)
Lipid biosynthesis proteins [BR:
cfg01004
]
Polyketide synthase
Modular PKS
CFREI_13035 (ppsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
DUF7080
Abhydrolase_6
Thiolase_N
Abhydrolase_1
Abhydrolase_3
Motif
Other DBs
NCBI-ProteinID:
WJZ03861
LinkDB
All DBs
Position
complement(2803541..2808319)
Genome browser
AA seq
1592 aa
AA seq
DB search
MDRRQMTVAELKAWLRAWVVTATGLPEEEITDDKPMESFGLSSRDVVILSGELENLLDVQ
LDATIAYEYPTIAGLSQRLIEGPSHKPKKAVRRDFTVISDSPGTHDIAIVGMAARYPKAL
NLNEMWELLISGRDGISELPAGRWSEYAANDVMTAKMSSVSTLGGYLDDIASFDAEFFGL
SPVEAANMDPQQRIALVLAWEALEHARIPAHRLRGSNVGVYIGSSNNDYGIMIASDPAEA
HPYALTGTASSIIPNRVSYVFDFRGPSVSIDTACSSSLVSVHHAVRALRCGDADIALAGG
VNILASPFVTTGFGELGVLSPSGKIHAFSEDADGFVRSDGAGLVVLKRVDDAIADGDNIL
AVIKGTAVNSDGRSNGLTAPNSDAQIAVLERAYMDAGIDPLSVDYVEAHGTGTILGDPIE
TTALGQVLGRERELREPLLLGSAKTNFGHTESAAGAAGLIKVVLSMQHQVLPPSINYSGP
NPYIDFDTERLEVVQDPREWPKYSGRAIAGISGFGFGGTNAHAVISEFHPDDYTVAALHS
PAELDSEQYLLPVSGLLPSRRRQAAADLADYLEGNADLEPVARSLARSNHGRSAAVVTAA
TKEEAIKRLRIVAEGKKSAGIAVADAPLNLGPVFVYSGFGSQYRKMAKDLLHTSPMFRER
LTELDADIIFESGWSLIELIEDDSRTYNTETAQVGITAIQIALTDLLAYFGAKPAAVVGM
SMGEIAAAYAAGGLSAKDAMRVACHRSRLMGEGEESLPEDQLGAMAVVEFSAADLDAFIA
ENPEYQGVEPAVYAGPGMTTIGGPREAVVKLVEKLEAEEKFARLLNVKGAGHTSAVEPLL
GELAAETAGIEPRPLEVPLFSSVDKGVVYPVGSIVHESDYWLRCTRGSVWFLEAITAAFA
AGHEMLVEICPNPVAIMGMMNTAFSVGKADAQLLFTLKQKLSPSDTLRDLLAKLYVAGAP
IQLDRVLGAGDYAEIPGVTWKEQRYWTAARPASQSVALPGHRAYLPDGTVVFSARAEHVP
SAEALIDAAAAAAFPESSVVAVEEYIALPPIGEITTLVRKNLGGVAISVYRVTGEVFPLL
AEGFASVAGLPQPTPVQQQVSTPSFIELDEEIEAVYWDPESGESVEQRMRSIVSESMGYD
IDDLPGELPLIDLGLDSLMGMRIKNRIEHDFQIPPLQVQALRDASVADVVTLVEDLVAGK
TTAVSDEIVPVSTAVALKATPESSTRSNIVQVAPRDASERLVFATWASITGAAVPGVTSE
LPEVTEEHAQAIAERLTERAGIEIKVEDIHEAAALEDLANIVRKGLEVEVEGNIRVLRER
PAGSQQPAVFLFHPAGGSSVVYQPLMRRLPEDVPVYGVERLEGTLEERAASYLDEIRTYA
DGHPVILGGWSFGGALAYEVAHQLVGSDVDIALIVLLDTVQPAEAIPDTMEETRARWERY
SAFAKKTYNLDFPVPYELLETQGEDALLTMMAEFLSSTDASAHGLAAGVLEHQRASFVDN
RILDRVQLEHWADVRVPVMLFRAERMHDGAIELEPRYANIHADGGWSAIVEQLDIIQLRG
DHLAIVDEPEIGTVGAHLTKRLREIEAHLEGN
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggatcgacgtcaaatgaccgttgcggagctcaaagcttggctgcgggcatgggtggtt
accgctacgggtcttccggaagaggagatcaccgacgataaacctatggagagttttggg
ttgtcgtctcgtgacgttgttatcctttcgggtgagttagaaaaccttcttgacgtgcaa
cttgatgccacgattgcatatgagtaccctacaatcgctggtcttagtcaacgtctgatt
gaagggccttcgcataaacctaagaaggcagttcgccgtgattttacggtgatttcagat
agtcctggtactcacgatattgcaatcgtgggtatggcagcacgctatccaaaagccctc
aaccttaatgaaatgtgggaactcttaatttccggtagggatggaatttcggaactgccg
gccggtaggtggtccgaatacgctgccaatgacgttatgaccgcgaaaatgtcgtcagtg
tccacacttgggggttatttagacgatattgctagcttcgatgcagagttttttgggctg
tctcctgtggaagccgcgaatatggatccgcaacagcgtattgcattagtccttgcttgg
gaggcattggagcatgcgcgaattccagcacatagattgcgtgggagcaatgtaggtgtg
tatatcggatcctccaataatgactatggaattatgatcgcttcagatccggcggaagcg
cacccgtatgctttaacaggtactgcaagttcgattattccgaaccgtgtttcttatgta
ttcgatttccgggggccttccgtaagtattgatacagcatgctcatcttcactagtcagt
gtgcaccatgcggtacgcgctttacgttgtggggatgctgatattgcgctggctggtggc
gttaatattttggctagtccgtttgtcaccacggggtttggagaattaggggtgttgagc
ccctccgggaagattcatgctttttccgaagacgccgatgggtttgtgcgctctgatgga
gctggtttagtggtgctaaaacgtgtcgatgatgcaatcgccgacggcgacaatatcctt
gctgtaatcaaaggcactgcggtgaattctgatggtcgctcaaatggtttgactgccccg
aattccgatgcacaaattgcggtattagaacgcgcttatatggatgccggtattgatcca
ctttcggtggattatgtggaggcacacggtaccggaacgattcttggggatcccattgaa
acaacggcgcttggtcaagtgctgggccgcgaacgtgaactgcgcgaaccattgcttttg
ggtagtgcaaaaacaaactttggtcatacagaatctgctgcaggcgcggccgggcttatt
aaagtggtgctgagtatgcagcaccaagtattgccgccttcaattaattattctggacca
aatccttatattgattttgatactgagcggcttgaagtggtacaagatccacgtgaatgg
cctaagtactctggtagagccattgcaggtatttcgggattcggctttggtggcaccaac
gcgcacgcggtgatctcagaatttcatccggacgattacacagtcgctgctttgcactca
cctgcagaacttgattcagaacaatacctattgccggtaagcgggttgctgccatcgcgg
cgtcgacaagcagcagcggatcttgcggactaccttgaaggaaatgccgaccttgagcca
gttgctcgttcgcttgcccgcagtaaccacggacgctctgccgcagtagtgaccgccgca
accaaagaagaggcaataaaacgcctgcgtattgtggcagagggaaaaaagagtgctggt
attgcggtagctgacgctccgctgaatctggggccggtgtttgtgtattcgggatttggt
tctcagtaccggaagatggctaaagatcttttgcatacttcgccaatgttccgcgagcgc
cttactgaactggatgccgatattatttttgaatccggctggtcacttatcgaactcatt
gaagatgactcgcgcacctacaataccgaaacagcccaagtgggtattaccgcgattcaa
attgcgctcactgatctgcttgcatattttggtgctaagccagcagcggtagttggcatg
tcaatgggcgaaatcgccgccgcctatgccgcgggaggtcttagcgcgaaagacgctatg
cgggtagcgtgccaccgctctcggctaatgggtgagggcgaagaatccctgcctgaagat
caattgggtgccatggccgtggttgaattttctgcggcagacctcgatgcatttattgcc
gaaaaccccgaatatcaaggcgttgagccagcagtttatgcgggtcctggcatgacaaca
attggtggaccccgcgaagcagtagtcaagctggtagaaaaacttgaagcggaagaaaaa
tttgcccgcttgcttaatgtaaaaggtgctgggcacaccagtgcggtagagccattactt
ggggagcttgctgcagaaactgccggtatcgaaccgcgaccacttgaagtcccgcttttt
agctccgtggataaaggcgtggtgtatcccgtaggttctattgtccatgaatctgactat
tggttgcgttgcacccgtggctccgtatggttcctagaggcaattacggcggcatttgca
gcggggcatgaaatgcttgtagaaatctgcccgaatccagttgcgattatgggcatgatg
aacaccgctttttcagttggtaaagccgatgctcaattgctgtttacgctaaagcaaaag
ctttcgccttcggataccctgcgtgatttattggcaaaattgtatgttgcaggtgcacca
atccaactcgaccgcgtccttggggctggcgactatgccgaaataccaggagtgacctgg
aaagagcaacgttattggactgccgcccgccccgcttctcagagtgtggcattgccaggg
catcgcgcatatctccccgacggtaccgttgtctttagtgcccgagcagagcatgtgcct
tctgctgaagcacttatcgacgccgcggccgctgcagcattccccgaatccagcgttgtg
gcagttgaggaatacattgcgcttcctccaataggcgaaataactacgcttgtgcgaaag
aatcttggtggcgtggcaatttccgtatatcgcgtgactggggaagtcttcccgcttctt
gctgaaggatttgccagtgttgcaggtttgccgcaaccaacacctgtacagcagcaagta
agtacgccatcgtttatcgaactcgatgaagaaattgaagcggtgtactgggatcctgaa
agtggtgagtctgtagagcaacggatgcgctcaattgtgtctgaatctatgggatacgat
atcgacgatctccctggtgaactgccgctaatcgatttggggcttgactcccttatgggg
atgcgtattaaaaaccgaattgagcacgatttccagatcccgccccttcaagttcaagca
ttgcgtgacgcaagtgttgcggatgtagtcacgcttgtggaggatctagtagctggcaaa
accactgcagtctccgatgaaatagttcctgtatccactgcagtagcacttaaggccact
cctgagtcttcaacccggtcaaatattgtgcaggtggcaccacgcgatgcttcggaacgt
ttagtttttgcaacttgggcatcgatcactggtgcggcggtgccgggtgtgaccagtgaa
ttaccagaggttactgaagagcatgctcaagcaatcgcagagcgcttgactgaacgcgct
ggtattgaaatcaaagttgaagatatccacgaggcagctgcgttagaagacctagctaat
attgttcgaaaaggactggaagtcgaagtggaaggaaatatccgcgtacttcgtgaacgt
ccagcaggctcgcagcaacctgcggtattcctcttccatcccgctggtggatcctcggta
gtttatcaaccactaatgcgccgactaccagaagatgttcctgtttatggtgtagagcgc
cttgaaggaaccctggaggaacgcgctgcaagctatctcgatgaaatccgaacatatgcg
gacgggcatccagtaatcctcggtggttggagtttcggtggtgcacttgcctatgaagtc
gcccatcaactggtaggtagcgatgtagatattgccctcatcgtgttattggatactgtc
caaccagccgaggccattccagacaccatggaagaaactcgtgctcgttgggaacgttat
tctgcatttgccaaaaaaacctataacctcgacttcccggttccatatgaattgctggaa
actcaaggtgaagatgcattacttaccatgatggctgagtttttatcgagcaccgatgct
tcggcgcatggtctagctgccggtgttctcgaacaccagcgcgcatcttttgtggacaat
cggattcttgatcgagtacagcttgagcattgggcagatgttcgtgtgccagttatgtta
ttccgcgcagagcgtatgcatgatggtgcaatcgaattggaacctcggtacgccaatatt
cacgctgatggtggttggtccgctatcgtagaacagttagatattattcagctgcggggt
gaccacctcgccatcgtggatgagccagagattggcacggtaggcgcacacctgaccaag
cgtttacgtgaaatcgaggctcatctagaaggaaactaa
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