Caulobacter flavus: C1707_03930
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Entry
C1707_03930 CDS
T05702
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cfh
Caulobacter flavus
Brite
KEGG Orthology (KO) [BR:
cfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfh03400
]
C1707_03930 (addB)
Enzymes [BR:
cfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1707_03930 (addB)
DNA repair and recombination proteins [BR:
cfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C1707_03930 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AYV45461
UniProt:
A0A2N5CV64
LinkDB
All DBs
Position
810968..813922
Genome browser
AA seq
984 aa
AA seq
DB search
MSGLAGSGWFSIPAHRPFVDDVAAGLVERLADLGPDALSHATLLTPTRRGARALADAFLA
VNGGRAVLLPQIRPLGDLDEGEPPFEPGDLALDLPPAVSSRRRRFELARLVHDNASLLDS
PPSAGQALEMAKAVSDLLDSCQIEEVPIIERLDGLADGDLAAHWQVSARFIRAMVEGWSA
RLSDLNLMDVSARRVALLRELAKQWTASPPPGVLVAAGSTGTAPATADLLIAVANAPQGC
VVLPGLDEDLAGEAWDQVGEQHPQGAMRRLLHRAGVDRGVVRRWRNEADSRGRWRRRLVN
EALRPAEATADWLAQIAKLRAESASVDPIAEGLSGLSLVNASGEEEAALACALLLREALE
TEGKTAALVTPDQQLARRAGLYLARWGVVPDSSAGAPLAASAPAVLARKLAALVLAPLDP
VGLLAVAKHPLLKADEAARTLERHGLRGPAPVDAAALKGRIAAFPEAVDLASRIHAAVEI
ACAPYAGAPVASPHLAAEALAKALESLVEPSALWAGSGGEALAALVSALIDDGQALPPTN
PLGFLDLLGRLVDEETLRVGGATHPQLRMLGAIEARLVRADRLILAGLEEGVWPQAAPID
PFLSRPMRGKLGLPPPERKIGLTAHDFAQAASAPDVILVHSQRRGGAPAVESRWLWRMKT
LARGAGLTLTERADVLDWARALDAPGPYAPVKRPAPCPPVEDRPRRMAVTRVEALTRDPY
AVWARDILKLYPLDRPDEPVEARARGTAIHAAFEVFALTYPDALPADGAEIFEGLYIAEL
VAAGMPPSALARERALAREAALWVMGLEARRRAGAEKIVVEAAGEITFQVDGRPFTLTAK
TDRLEPTRDGAAAHILDYKTGAAPSQKQVDTGFSPQLTLTAAILQNGGFTDIGPRQPGDL
TYIRVTGRRPAGEEQVRAAAGSQSEEAARKAFDGLVDLIRKYDDPTRPYLSRTAPQFVHD
HAGDYGHLARVFEWSTSGDEGDGE
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcctggccggttccggctggttctcgatcccggcgcaccggccgttcgtcgac
gacgtggccgcgggcctggtggaacgcctcgcggacctgggtcccgacgccctgtcgcac
gccaccctgctgacgcccacgcgacgcggcgcccgcgccttggccgacgcgttcctggcg
gtgaacggcgggcgggcggtgctgctgccgcagatccgccccctgggcgacctcgacgag
ggcgagccgccgttcgagcccggcgacctggcgctggacctgccgccggccgtctccagc
cgccgccgccggttcgagctggcccgcctggtgcacgacaacgcctcgctgctcgacagt
ccgcccagcgccggccaggccctggagatggccaaggccgtctccgacctgctcgacagc
tgccagatcgaggaggtcccgatcatcgagcgcctcgacggcctggccgacggcgacctg
gccgcccactggcaggtctcggcccggttcatccgggccatggtagaaggctggagcgcg
cggctgtcggacctgaacctgatggacgtcagcgcccgccgcgtggccctgctgcgcgaa
ctggccaagcagtggacggccagtccgccacccggcgtgctggtcgccgccggctcgacc
ggcaccgcgcccgccaccgccgacctgctgatcgcggtcgccaacgcgccgcagggctgc
gtcgtgctgccgggcctcgacgaggacctggcgggcgaagcctgggaccaggtcggcgag
cagcatccgcagggcgccatgcgccgccttctccaccgggccggcgtggatcgcggcgtc
gtccgccgctggcgcaacgaggccgacagccggggccgctggcgccggcgcctggtcaac
gaggccctgcgcccggccgaggccaccgccgactggctggcccagatcgccaagctgcgc
gcggagtccgccagcgtcgacccgatcgccgagggcctgtcgggcctgtctttggtcaac
gcctcgggcgaggaggaggcggccctggcctgcgccctcttgctgcgcgaagccctggag
accgaaggcaagaccgccgcgctcgtgacgcccgaccagcagctggcccgccgggctggg
ctctatctggcccgctggggcgtcgtgcccgacagctcggccggcgcgccgctggcggct
tcggccccggccgtgctggctcgcaagctggccgccctggtgctggcgccgctggatccc
gtcggcctgctggccgtggccaagcacccgctgctgaaggccgacgaggccgcccggacg
ctggagcgacacggactgcgcggtcccgcccccgtcgacgccgccgccttgaagggccgc
atcgccgcctttcccgaggccgtggacctggccagccgaatccacgccgccgtcgagatc
gcctgcgcgccctatgccggcgcgcccgtcgcctcgccgcacctggccgccgaggccctg
gccaaggcgctggagagcctggtcgagccgtcggcgctgtgggccggttcgggcggcgag
gccctggcggccctggtctcggccctgatcgacgacggccaggccctgccgccgaccaat
ccgctgggcttcctcgacctgctgggccgtctggtcgacgaggagaccctgcgcgtcggc
ggggccacgcacccccaactcagaatgctgggcgccatcgaggctcgcctcgtgcgcgcc
gaccggctgatcctggccgggctggaggaaggcgtctggccgcaggccgcgccgatcgac
ccgttcctgtcgcggccgatgcgcggcaagctcggcctgccgccgcccgagcgcaagatc
ggcctcaccgcccacgacttcgcccaggccgccagcgcccccgacgtgatcctggtgcac
agccagcgccgtggcggcgcccccgccgtcgagagccgctggctgtggcggatgaagacc
ctggcgcgcggcgcgggcctgaccctgaccgagcgcgccgacgtgctggactgggctcgc
gccctcgacgcgcccggcccctacgcgccggtcaagcgccccgccccttgcccgccggtc
gaggatcgcccgcgccgaatggccgtcacccgcgtcgaggccctgacccgcgacccctac
gcggtctgggcgcgcgacatcctcaagctctatcccctcgaccgtccggacgagcccgtg
gaggcgcgcgcccggggcacggccatccacgcggccttcgaggtgttcgccctgacctat
cccgacgccctgccggccgacggcgcggagatcttcgagggcctgtacatcgccgagctg
gtcgccgccggcatgccgccttcggccctggcccgcgagcgcgccctggcccgcgaggcg
gctctgtgggtcatgggcctggaggctcgccgccgggccggcgcggagaagatcgtggtc
gaggccgccggcgagatcaccttccaggtcgacggccgccccttcaccctgacggccaag
accgaccggctggagccgacccgcgacggcgccgccgcccacatcctcgactacaagacc
ggcgccgctcccagccagaagcaggtcgacaccggcttctcgccgcagctgaccctgacg
gcggccatcctgcagaacggcggctttaccgacatcggcccgcgccagccgggcgacctg
acctacatccgcgtcaccggccgccgcccggccggcgaggaacaggtgcgcgccgccgcc
ggctcgcaaagcgaggaggccgcccgcaaggccttcgacggcctggtcgacctgatccgc
aagtacgacgacccgacgcggccctacctgtcgcgcaccgccccgcagttcgtgcacgac
cacgccggcgactacggccacctggcgagggtgttcgaatggtcgaccagcggcgacgag
ggggacggggaatga
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