KEGG   Caulobacter flavus: C1707_04040
Entry
C1707_04040       CDS       T05702                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cfh  Caulobacter flavus
Pathway
cfh03030  DNA replication
cfh03410  Base excision repair
cfh03420  Nucleotide excision repair
cfh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cfh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C1707_04040
   03410 Base excision repair
    C1707_04040
   03420 Nucleotide excision repair
    C1707_04040
   03440 Homologous recombination
    C1707_04040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfh03032]
    C1707_04040
   03400 DNA repair and recombination proteins [BR:cfh03400]
    C1707_04040
Enzymes [BR:cfh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C1707_04040
DNA replication proteins [BR:cfh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C1707_04040
DNA repair and recombination proteins [BR:cfh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     C1707_04040
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C1707_04040
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Taq-exonuc
Other DBs
NCBI-ProteinID: AYV45481
UniProt: A0A2N5CV87
LinkDB
Position
834107..837025
AA seq 972 aa
MFARMTDVAAPESAQTRPLTQDGPALRLFLVDGSAYLFRAYHALPPLTRKSDGLPVGAVQ
GFCNMLWKLMRDMQGDAPTHLAVIWDHSEKTFRNKLYDQYKAHRPPPPEDLIPQFPLVRD
ATRAFGVPAIELPGYEADDLIAAYACAARDAGGEAVIVSSDKDLMQLVGDSVSMFDPMKG
VRIGRNEVFEKFGVYPEQVVDVQSLCGDSVDNVPGAPGIGIKTAAQLITEYGDLDTLLAR
AGEIKQPKRRETLIAFADQIRLSKALVTLDCNTPLPEPMDELVVREPDKAVLAAFLDEME
FRTLARRVGDGNAAAAPRTLEARPSDKAVTAPVTSVSYVSAAARAAANPVAEPVAIDHAS
YVCVRDLATLQVWIDKARAKGIVAFDTETDALSSANAGLCGVSLAIAPGEACYIPVSHED
KPQDGGLAFEAPAKLEQISEEEALAALKPLLEDPAVLKVAQNAKYDIAVMARRGIAVAPI
EDTMLISYVLEAGLHGHGMDELSELWLGHKPIPFKEVAGSGKSQISFKHVALDKATAYAA
EDADVTLRLYNVLRPRLAAEGLLTVYETLERPMPGVLATMENDGVRVDPETLRRLSNEFS
LRMAEFEEQAQKLAGRPFNLGSPKQIGDVLFGELNLKGGKKTATGQWSTDSDVLESLANE
HELPRVLLDWRQLSKLKGTYTENLIAAISERTGRVHTSYALAATTTGRLSSSDPNLQNIP
VRTEEGRKIRKAFVAAPGKVLISADYSQIELRLLAHIGQIPQLQQAFRDGLDIHAMTASE
MFDTPIEGMDPLIRRRAKAINFGIVYGISAFGLANQLGIGQGEAGAYIKTYFERFPGIQA
YMDATKAFVREHGYVTTIFGRKINIPDIHAKSVGQRQFSERAAINAPIQGAAADVMRRAM
ARMPAALEEANLEARMLLQVHDELVFEAPEHEAQAVCDVARRVMEGAAEPAVALSVPLTV
EARAALNWDEAH
NT seq 2919 nt   +upstreamnt  +downstreamnt
atgttcgcgcgcatgaccgacgtcgccgcgcccgaatccgcccagacccgtccgctcacc
caggacggccccgccctgcgcctcttcctggtggacggctcggcctatctgttccgcgcc
tatcacgccctgccgcccctgacccgcaagagcgacggcctgcccgtcggcgcggtgcag
ggcttctgcaacatgctgtggaagctgatgcgcgacatgcagggcgacgcgcccacgcac
ctggcggtgatctgggaccactcggaaaagacgttccgcaacaagctgtacgaccagtac
aaggcccaccgtccgccgccgccggaagacctgatcccgcagttcccgctggtgcgcgac
gccacgcgcgccttcggcgtgccggccatcgagctgcccggctacgaggccgacgacctg
atcgccgcctatgcctgcgccgcccgcgacgccggcggcgaggccgtcatcgtctcgtcc
gacaaggatctgatgcagctggtgggcgacagcgtctcgatgttcgacccgatgaagggg
gtgcgcatcggacgtaacgaggtgttcgagaagttcggcgtctatcccgagcaggtggtc
gacgtgcagtcgctgtgcggcgacagcgtcgacaacgtgcccggcgcgccgggcatcggc
atcaagaccgccgcccagctgatcaccgaatacggcgacctcgacacgctgctggcccgc
gccggcgagatcaagcagcccaagcgccgcgagaccctgatcgccttcgccgaccagatc
cgcctgtccaaggccctggtcacgctggactgcaacacccccctgcccgagccgatggac
gagctggtggtgcgcgagcccgacaaggccgtgctggccgccttcctcgacgagatggag
ttccgcacgctggcccgccgggtcggcgacggcaacgccgcggccgcgccccgcacgctg
gaggcccgtccgtcggacaaggccgtcaccgccccagtgactagcgtctcctacgtctcg
gccgccgcccgcgccgcggccaatccggtggccgagccggtcgccatcgaccacgcgtcc
tacgtctgcgtgcgggacctggccacgctgcaggtctggatcgacaaggcgcgcgccaag
gggatcgtcgccttcgacaccgagaccgacgccctgtcgtcggccaacgccggcctgtgc
ggcgtgtcgctggccatcgcgccgggcgaggcctgctacatccccgtcagccacgaggac
aagccgcaggatggcggcctggccttcgaggcgcccgccaagctggagcagatctccgag
gaagaggcgctggccgccctcaagccgctgctggaagacccggcggtgctgaaggtcgcc
cagaacgccaagtacgacatcgccgtgatggcccgccgggggatcgccgtcgccccgatc
gaggacaccatgctgatcagctacgtgctggaggcgggtctgcacggccacggcatggac
gagctgtcggaactgtggctgggccacaagcccatcccgttcaaggaagtggcgggctcc
ggaaagagccagatcagcttcaagcacgtggccctggacaaggccacggcctacgcggcc
gaggacgccgacgtcaccctgcgcctctacaacgtgctgcgcccgcgcctggcggccgaa
ggcctgctgaccgtgtacgagaccctcgagcggccgatgccgggcgtgctggcgacgatg
gagaacgacggcgtccgcgtcgatcccgagacgctgcgccgcctgtccaacgagttctcg
ctgcgcatggccgagttcgaggaacaggcgcagaaacttgccggccgcccgttcaacctg
ggcagccccaagcagatcggcgacgtgctgttcggcgagctgaacctgaagggcggcaag
aagaccgccactggccagtggtcgaccgacagcgacgtgcttgagagcctggccaacgaa
cacgagctgccgcgcgtgctgctcgactggcgccagctgagcaagctgaagggcacctac
accgagaacctgatcgccgcgatcagcgagcgcacgggccgggtgcacacctcctacgcc
ctggcggcgaccaccacgggccgcctgtcgtcgtcggaccccaacctgcagaacatcccg
gtccgcaccgaggagggccgcaagatccgcaaggctttcgtggccgcgccgggcaaggtg
ctgatcagcgccgactacagccagatcgaactgcgcctcttggcccacatcggccagatc
ccgcagctgcagcaagccttccgcgacggcctcgacatccacgccatgacggcctcggag
atgttcgacaccccgatcgagggcatggacccgctgatccgccgccgggccaaggccatc
aacttcggcatcgtctatggcatcagcgccttcggcctggccaaccagctgggcatcggc
cagggcgaggccggggcctacatcaagacctacttcgagcgcttccccggcatccaggcc
tatatggacgccaccaaggccttcgttcgcgagcacggctacgtgaccacgatcttcggc
cgcaagatcaacatccccgacatccacgccaagtcggtggggcagcggcagttctccgag
cgggcggccatcaacgccccgatccagggcgcggccgccgacgtcatgcgtcgggccatg
gcccgcatgcccgccgccctggaagaggcgaacctggaggcccgaatgctgctgcaggtg
cacgacgaactggtgttcgaggcccccgagcacgaggcccaggccgtctgcgacgtcgcc
cggcgggtcatggagggcgcggccgagccggccgtggcgctttccgtgcccctcacggtc
gaggcccgcgcggctctgaactgggacgaggcccactaa

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