Caulobacter flavus: C1707_06700
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Entry
C1707_06700 CDS
T05702
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cfh
Caulobacter flavus
Brite
KEGG Orthology (KO) [BR:
cfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfh03016
]
C1707_06700
Enzymes [BR:
cfh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C1707_06700
Transfer RNA biogenesis [BR:
cfh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C1707_06700
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AYV45964
UniProt:
A0A2N5D607
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All DBs
Position
1404118..1404735
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AA seq
205 aa
AA seq
DB search
MASFVHEGDLPDGVFAGATAIAIDSETMGLRLGRDPLCVVQLSSGDGDAHVVRLDRSTYH
APNLKKLLADPGVLKLFHFGRFDIAMFLLHLGVMTAPVYCTKIASKLARTYTDRHGLKDV
TRELMGVELSKAQQSSDWGADSLSPEQVAYAASDVLHLHGLRERLNAMLVREGRMALAQA
AFDYLPHRAALDLAGWEDVDIFAHA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
ttggccagctttgttcatgaaggcgacctgcccgacggcgtgttcgccggggcgaccgcg
atcgccatcgattcggaaaccatgggcctgcgcctcgggcgcgatccgctctgcgtggtg
cagctgtcgtccggcgacggcgacgcccacgtggtgcgcctggaccgctcgacctatcac
gcgccgaacctgaagaagctgctggccgatcccggcgtgctgaagcttttccacttcggc
cgcttcgacatcgccatgttcctgctgcatctgggcgtcatgaccgcgcccgtgtactgc
acgaagatcgcctccaagctcgcccgcacctataccgaccgccacggcctcaaggacgtg
acgcgcgaactgatgggcgtggaactgtccaaggctcagcagagctcggactggggcgcc
gattcgctgagccccgagcaggtggcctacgcggcctctgacgtgctgcatctgcacggc
cttcgcgagcgtttgaacgccatgctggtgcgcgagggccgcatggccctggcccaggcc
gccttcgactatctgccccaccgcgccgcgctcgacctggccggctgggaagacgtcgac
atcttcgcgcacgcttaa
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