KEGG   Caulobacter flavus: C1707_10090
Entry
C1707_10090       CDS       T05702                                 
Name
(GenBank) VapC toxin family PIN domain ribonuclease
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
cfh  Caulobacter flavus
Brite
KEGG Orthology (KO) [BR:cfh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cfh03016]
    C1707_10090
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cfh02048]
    C1707_10090
Transfer RNA biogenesis [BR:cfh03016]
 Prokaryotic type
  tRNA degradation factors
   C1707_10090
Prokaryotic defense system [BR:cfh02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    C1707_10090
SSDB
Motif
Pfam: PIN DUF6214 DUF5615
Other DBs
NCBI-ProteinID: AYV46585
UniProt: A0A2N5CN26
LinkDB
Position
2170684..2171073
AA seq 129 aa
MAAFVLDTNVAIHLRDGDPVISAKIAALDGAVLLSIVSRVELEGGVYREPADVAVRRARL
DAMLDILPVLDFGAEAADAYRAIVQATGYSRRKILDRMIAAQALTHRATLVTCNPADFQD
VPGLALLAW
NT seq 390 nt   +upstreamnt  +downstreamnt
gtggcggccttcgtcctcgacaccaacgtggcgatccacctgcgtgatggcgatccggtc
atttcagccaagatcgcggcgttggatggcgcggtgctgctgtcgatcgtctcacgcgtc
gaactggaaggcggtgtctatcgcgagccagcggacgtagccgtgcgccgggctcggctg
gacgccatgctcgatatcctgccggtgctggatttcggcgccgaggcggccgacgcctat
cgggcgatcgtgcaggcgaccggctactcccgccgcaagatcctcgatcggatgatcgcg
gcccaggcgctgacccatcgcgccaccctggtcacctgcaacccggccgacttccaggat
gtcccgggactggcgctgctggcctggtag

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