Caulobacter flavus: C1707_13075
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Entry
C1707_13075 CDS
T05702
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cfh
Caulobacter flavus
Pathway
cfh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cfh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C1707_13075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfh03021
]
C1707_13075
Transcription machinery [BR:
cfh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C1707_13075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
LRR_9
Com_YlbF
Motif
Other DBs
NCBI-ProteinID:
AYV47118
UniProt:
A0A2N5D4W8
LinkDB
All DBs
Position
complement(2848199..2850154)
Genome browser
AA seq
651 aa
AA seq
DB search
MSNNSTAETEAPEATGGDGPLLDLTDAGVKKFIKQAKARGYVTMDELNKVLPSEEVSPDA
IEDTLAMLSEMGVNVVEAEEDAENAEGGEVATRDENTAVITSDKPAAYDRTDDPVRMYLR
EMGSVELLSREGEIAIAKRIEAGRDTMIRGLCESALTFEAIMVWREELSTGRILLREVID
LEGTYAAINGGAAQPAADDDEGPAEPVDDEAGEAKPEGEGEDEDDFDDGAGPTVSAMEGE
LREGVMAILDAIASEFETFRKLQDKLVGSRLKGQDLSDADRKAYEGLSATIIQHLKTLKL
NNNRIEALVEQLYAINKRLIGLEGRLLRLADSYGISRAEFLKAYFGSELNPTWVDQVKGM
GVRWTKFVENDSNSVGDIRQEIAALATETGVPIDDYRRIVQTVQKGEREARQAKKEMVEA
NLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRS
IADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAK
EPISLETPIGDEEDSHLGDFIEDKNAVLPIDAAIQSNLRETTTRVLASLTPREERVLRMR
FGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaattccacggccgagaccgaagcgcccgaagccaccggtggtgatggtccg
ctcctcgacctgaccgacgccggcgtaaagaagttcatcaagcaggcgaaagcccgcggc
tacgtcacgatggacgagctgaacaaggtgctgccgtcggaagaagtcagcccggacgcc
atcgaagacaccctggccatgctcagcgagatgggcgtcaacgtcgtcgaggccgaggaa
gacgccgagaacgccgagggcggcgaggtcgccacccgcgacgagaacaccgccgtcatc
accagcgacaagccggccgcctacgaccgcaccgacgaccccgtgcgcatgtacctgcgc
gagatgggctcggtcgagctgctgagccgcgagggcgaaatcgccatcgccaagcgcatc
gaggccggccgcgacaccatgatccgcggcctgtgcgaaagcgcgctcaccttcgaagcc
atcatggtgtggcgcgaggaactgagcaccggccgcatcctgctgcgcgaagtcatcgac
ctggaaggcacctacgcggccatcaacggcggcgcggcccagcctgcggccgatgacgac
gaaggtccggccgagcccgtcgacgacgaagccggcgaggccaagcccgagggcgaaggc
gaggacgaggacgatttcgacgacggcgccggcccgaccgtcagcgccatggaaggcgag
ctgcgcgaaggcgtcatggccatcctcgacgcgatcgccagcgagttcgagaccttccgc
aagctgcaggacaagctggtcggcagccgcctgaagggccaggacctgtcggacgccgac
cgcaaggcctacgagggcctgtctgcgacgatcatccagcacctgaagacgctgaagctg
aacaacaaccgcatcgaggcgctggtcgagcagctctatgcgatcaacaagcgcctgatc
ggcctggaaggccgcctgctgcgcctggccgacagctacggcatcagccgcgccgagttc
ctgaaggcctatttcggctccgaactgaaccccacctgggtcgaccaggtgaagggcatg
ggcgtgcgctggaccaagttcgtcgagaacgacagcaactccgtcggcgacatccgccag
gaaatcgccgcgctggccaccgagaccggcgtgccgatcgacgactaccgccgcatcgtc
cagaccgttcagaagggcgagcgcgaggctcgtcaggccaagaaggaaatggtcgaggcc
aacctgcgcctcgtgatctcgatcgccaagaagtacaccaaccgtggcctgcagttcctg
gacctgatccaagaaggcaacatcggcctgatgaaggccgtcgacaagttcgagtaccgt
cgcggctacaagttctcgacctacgccacctggtggatccgtcaggccatcacccgctcg
atcgccgaccaggcgcggaccatccgcatcccggtccacatgatcgagacgatcaacaag
atcgtccgcaccagccgccagatgctgcacgagatcggccgcgagccgaccccggaagag
ctggccgaaaagctggccatgccgctggagaaggtgcgcaaggtcctgaagatcgccaag
gagccgatctcgctcgaaacgccgatcggcgacgaggaagacagccacctgggcgacttc
atcgaggacaagaacgccgtcctgccgatcgacgcggccatccagtccaacctgcgggaa
accaccacccgcgtgctggcctcgctgaccccgcgggaagagcgcgtgctgcgcatgcgc
ttcggcatcggcatgaacaccgaccacacgctggaagaagtcggccagcagttctcggtc
acccgcgaacgcatccgtcagatcgaggccaaggccctgcggaagctcaagcacccgagc
cgctcgcggaagctgcgcagcttcctcgacagctga
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