Caulobacter flavus: C1707_17050
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Entry
C1707_17050 CDS
T05702
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cfh
Caulobacter flavus
Pathway
cfh03030
DNA replication
cfh03430
Mismatch repair
cfh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1707_17050
03430 Mismatch repair
C1707_17050
03440 Homologous recombination
C1707_17050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfh03032
]
C1707_17050
03400 DNA repair and recombination proteins [BR:
cfh03400
]
C1707_17050
Enzymes [BR:
cfh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1707_17050
DNA replication proteins [BR:
cfh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1707_17050
DNA repair and recombination proteins [BR:
cfh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1707_17050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AYV47827
UniProt:
A0A2N5CUG3
LinkDB
All DBs
Position
3739990..3743421
Genome browser
AA seq
1143 aa
AA seq
DB search
MSGVEGQGFVHLRVRSAYSLLEGAIKADKIPGMAAAGGMPAAGITDRANLFGALEFSVYS
KDNGVQPIIGCALPVKGIGAKPSERWSREPTITLLVQNERGYLNLSELSSLAYLESGELA
EPVVPWAKVVEYSEGLILLSGGTDGPVDNLFAAGKTAEGNAALAEMQKVFGDRFYVELQR
HGLPQQAAAEPGLVDWAYEHDAPLVATNDCYYAKPELYDAHDALLCIADGSFVGQDERRR
VTPEHWFKPAADMRKLFADLPEACDNTLDIARRCAFMVKKRDPILPSFPTGDGRNEAEEL
AHQAREGLRKRLEGLTLAMDEHVYWERLDFELGIIVKMGFPGYFLIVSDFIKWGKDHGIP
VGPGRGSGAGSLVAWVLTITDLDPLRFGLLFERFLNPERVSMPDFDVDFCQERREEVIAY
VQDKYGRDRVAQIITFGSLQARAVLRDVGRVMQLPLGLVDRLCKMVPNNPAAPVTLAQAI
DIEPRLKQAKNEDANVSNCLDVALQLEGLFRNASTHAAGVVIGDRPLTQLTPLYKDPRSD
FPATQFNMKWVESAGLVKFDFLGLKTLTVLDRAVKHLRKRGMEVDLGRLPFDDAKSYELL
ASGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMDNIDTFVDCKFGRKPVD
TLHPSLENVLRETYGVIVYQEQVMQIAQILAGYSLGEADLLRRAMGKKKKEEMDLQKIRF
VSGAKEKGVPEEQSGSIFELVAKFAGYGFNKSHAAAYALIAYQTAWLKANTPVEFLAASM
SLDISNTDKLAVFHQDARRFSITVRAPDVNRSGADFEVENGEVLYALGAVRNVGLEAMKH
LVAVRDEGGPFRDIFDFVERVDPKQVNKRAIENLARAGAFDSFNKNRAQVFANADVLIAH
GQSVAADRQGGQHALFGGDAAASRPRLKKVEPWTQVDLLDEELSAVGFYLTGHPLEDMVG
MLRRRRTVMLTEAMAQAEAGAEALRMCGIVRRRQERASQSGERFAFVSLSDPSGEYEVLF
PPESLRKCRDVLEPGKGVVIKVRSKARDGEVRFFGDDAEPIEKAIENVVAGLRVHLSPAA
TEIEALKRRIEPAATQKGGEISFVAALGGGREIELKLPGRYTLDASLRGALKTAPGVALL
EDI
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgtggaaggtcagggtttcgtccacctccgcgtccggtcggcctattcgctg
ctggagggggccatcaaggccgacaagatcccgggcatggccgccgccggcggcatgccc
gccgcggggatcaccgaccgggccaacctgttcggcgccctggagttctccgtctactcc
aaggacaacggcgtccagccgatcatcggctgcgccctgccggtcaagggcatcggcgcc
aagccgtccgagcgctggtcgcgtgagccgacgatcaccctgctggtgcagaacgagcgg
ggctacctgaacctctcggaactgtcgtcgctggcctatctggaaagcggcgaactggcc
gagccggtggtgccttgggccaaggtggtcgagtattccgaaggcctgatcctgctgtcg
ggcggaaccgacggtccggtggacaacctgttcgccgccggcaagacggccgagggcaac
gccgccctggccgagatgcagaaggtgttcggcgatcgcttctatgtcgagctgcagcgg
cacggcctgccgcagcaggcggcggccgagccggggctggtggactgggcctacgagcac
gacgcgccgctggtcgccaccaacgactgctactacgccaagcctgagctctacgacgcg
cacgacgcgttgctgtgcatcgccgacggctcgttcgtcggccaggacgagcgccgccgg
gtgacgcccgagcactggttcaagcccgccgccgacatgcgcaagctgttcgccgacctg
cccgaggcctgcgacaacactctcgacatcgcccgccgctgcgccttcatggtcaagaag
cgcgacccgatcctgcccagcttcccgaccggcgacggccgcaacgaggccgaggagctg
gcgcaccaggcacgcgagggtctgcgcaagcgcctcgagggcctgaccctggcgatggac
gagcacgtctactgggagcggctcgactttgaactgggcatcatcgtcaagatgggcttc
cctggctacttcctgatcgtttccgacttcatcaagtggggcaaggatcacggcattccg
gtcggtccggggcggggttcgggcgccggctcgctggtcgcctgggtgctgaccatcacc
gacctggatccgctgcgtttcggcctgctgttcgagcgcttcctcaatcccgaacgggtc
tccatgcccgacttcgacgtcgacttctgtcaggagcgacgcgaagaggtgatcgcctac
gtgcaggacaagtacggccgcgaccgcgtggcccagatcatcaccttcggttcgttgcag
gcccgcgccgtgctgcgcgacgtcggccgggtgatgcagctgccgctgggtctcgtcgac
cgcctttgcaagatggtccccaacaacccggccgcgccggtgaccctggcccaggccatc
gatatcgagccgcgcctcaagcaggccaagaacgaggacgccaacgtctccaactgcctg
gacgtggccctgcagctggaaggcctgttccgcaacgcctcgacccacgccgccggcgtg
gtgatcggcgaccggccgctgacccagctgaccccgctctacaaggatccgcgttcggac
ttcccggccacccagttcaacatgaagtgggtcgagagcgccggcctggtgaaattcgac
ttcctgggccttaagaccctgaccgtgctcgaccgcgcggtgaagcatctgcgcaagcgc
ggcatggaggtggatctgggccgcctgccgttcgacgacgccaagagctacgaactgctg
gcctcgggccagacggtcggcgtgttccagctggaaagccagggcatgcgcgacaccctg
cgcaagatgcgctgcggctcgatcgaggagatcaccgcgctgatctcgctctatcgaccg
ggcccgatggacaacatcgacaccttcgtcgactgcaagttcggccgaaagcccgtcgac
accctgcacccctcgctcgagaacgtgctgcgcgagacctacggggtcatcgtgtaccag
gagcaggtgatgcagatcgcccagatcctggccggctacagcctcggcgaggccgacctg
ctgcgtcgcgccatgggtaagaagaagaaggaggagatggatctccagaagatccgtttc
gtctccggcgccaaggaaaagggcgtgcccgaggagcagtcgggctcgatcttcgagctg
gtggccaagttcgccggctacgggttcaacaagagccacgcggccgcctacgccctgatc
gcctaccagacggcctggctgaaggccaacacgccggtcgagttcctcgccgcgtcgatg
agcctcgacatctccaacaccgacaagctggcggttttccaccaggacgcgcgccgcttc
agcatcaccgtgcgggcgccggatgtgaaccggtcgggcgccgacttcgaggtcgagaac
ggcgaggtgctctacgcgctgggcgcggtgcgcaacgtcggcctggaagccatgaagcac
ctggtggccgtgcgcgacgagggcgggccgttccgcgacatcttcgatttcgtcgagcgc
gtcgatcccaagcaggtcaacaagcgcgccatcgagaacctggcgcgggcaggggccttc
gactcgttcaataagaaccgggcccaggtcttcgccaacgccgacgtgctgatcgcccac
ggccagagcgtcgcggccgaccgccagggcggccagcacgcgctgttcggcggtgatgca
gccgccagccggccgcgcctgaaaaaggtcgagccatggacccaggttgatctgctcgac
gaggagctttcggccgtcggcttctatctgaccggccacccgcttgaggacatggtcggc
atgctgcgccgtcggcgcaccgtgatgctgaccgaggccatggcccaggccgaggcgggg
gccgaggccctgcgcatgtgcggcatcgtccgccgccgccaggaacgcgcctcccagagc
ggcgagcgtttcgccttcgtgtcgctgtcggatccgtctggcgagtacgaggtgctgttc
ccgccggaatccctgcgcaagtgccgcgacgtgctcgagccgggcaagggcgtggtcatc
aaggtccgctccaaggcccgcgacggcgaggtgcgcttcttcggcgacgacgccgagccg
atcgagaaggccatcgagaacgtcgtggccggcctgcgcgtgcacctgtcgccggccgcc
accgagatcgaggccctcaagcggcgcatcgagccggcggcgacccagaagggcggcgag
atcagcttcgtcgcggccctgggcggggggcgagagatcgagctgaagctgccgggccgc
tacacgctcgacgcctcgctgcgcggcgccctgaagaccgcgccgggcgtggcgctgctg
gaagacatctag
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