Caulobacter flavus: C1707_19945
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Entry
C1707_19945 CDS
T05702
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
cfh
Caulobacter flavus
Pathway
cfh00040
Pentose and glucuronate interconversions
cfh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C1707_19945
Enzymes [BR:
cfh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
C1707_19945
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Beta-prop_THOC3
Aq_1974-like
Motif
Other DBs
NCBI-ProteinID:
AYV48348
UniProt:
A0A2N5CL98
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All DBs
Position
4397811..4399127
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AA seq
438 aa
AA seq
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MRNVLIGLATAFAVALPAFAQAPAAPAAAPPREWVDKDTGHRVVRLSDEPGSSSLYFNYN
GYTPQGDKLVIATPKGLSTVDLATRKLVPLVEEDGKFLFVGRKTRSAYYIVTEGKTRVVK
AVDIDSRKVRVVAKFDRGDIQTINADETLLGGVVVTKPEIETRPDGMLKRDNRFDQADYA
ANGPDGKPLSFAEAKEVRLNERLESKIPMEMFVIDTRTGEKRVVHTATDWLNHLQFSPTD
PNLLMFCHEGPWHKVDRLWLLRTDQPDAKPVKIHTRTMNMEIAGHEWFSADGKTVWYDLQ
TPRGEDFWVAGYEIATGKRAWYHVERNAWSVHFNSSPDGKLFAGDGGDSEMVAHAPDGKW
LYLMHPRGIPDVAGIHAPDSEHLIRPGVIDTEKLVNMSGHDYRLEPNVNFTPDGKWLVFR
SNMHGANHVYAVELAKAK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacgtgctgatcggcctggcgaccgccttcgccgtcgccctccccgccttcgcc
caggcgccggccgcgccggcggccgccccgccgcgcgaatgggtcgacaaggacaccggc
catcgcgtcgtgcgcctgtccgacgagccgggctcgagcagcctctacttcaactacaac
ggctacacgccgcagggcgacaagctggtcatcgccacgcccaaggggctcagcacggtt
gacctggccacccgcaagctggtgccgctggtcgaggaagacggcaagttcctgttcgtc
ggccgcaagacgcgctcggcctactacatcgtcaccgagggcaagacccgcgtggtcaag
gccgtcgacatcgacagcaggaaggtccgcgtggtcgccaagttcgaccgcggcgacatc
cagacgatcaacgccgacgagaccctgctcggcggagtggtggtgaccaagcccgagatc
gagacccgccccgacggcatgctcaagcgcgacaaccgcttcgaccaggccgactacgcg
gccaacggccccgatggcaagccgctgagcttcgccgaggccaaggaagtgcggctcaac
gagcggctcgagtcgaagattccgatggagatgttcgtcatcgacacccgcaccggcgaa
aagcgcgtggtgcacacggcgaccgactggctgaaccacctgcagttctcgccgaccgac
cccaacctgctgatgttctgccacgagggtccctggcacaaggtcgaccgcctctggctg
ctgcggaccgaccagcccgacgccaaaccggtgaagatccacacccgcaccatgaacatg
gagatcgccgggcacgaatggttcagcgcggacggcaagaccgtctggtatgacctgcag
acgccgcgcggcgaagacttctgggtcgccggctacgagatcgccaccggcaagcgcgcc
tggtaccacgtcgagcgcaacgcctggtcggtgcacttcaactccagcccggacggcaag
ctgttcgccggcgacgggggcgacagcgagatggtcgcccacgcgccggacggcaagtgg
ctgtacctgatgcacccgcgcgggattcccgacgtcgccggcatccacgcccccgactcc
gagcacctgatccgccccggcgtcatcgacaccgaaaagctggtcaacatgagcggccac
gactaccgcctggagccgaacgtcaacttcacgcccgacggcaagtggctggtgttccgt
tcgaacatgcacggcgccaaccacgtctacgcggtggagctggcgaaggccaagtag
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