Caulobacter flavus: C1707_20605
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Entry
C1707_20605 CDS
T05702
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cfh
Caulobacter flavus
Pathway
cfh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1707_20605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfh03019
]
C1707_20605
03009 Ribosome biogenesis [BR:
cfh03009
]
C1707_20605
Enzymes [BR:
cfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C1707_20605
Messenger RNA biogenesis [BR:
cfh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1707_20605
Ribosome biogenesis [BR:
cfh03009
]
Prokaryotic type
rRNA helicases
C1707_20605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
EryCIII-like_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
AYV48467
UniProt:
A0A2N5CPD6
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All DBs
Position
4534335..4536470
Genome browser
AA seq
711 aa
AA seq
DB search
MPFPASHPALERALAAQGYAEPTPVQAAVLEADAEGRDLLVSAQTGSGKTVAFGLAAAPT
LLGDAERLPKAGLPMCLVIAPTRELAMQVNRELEWLYAQAGATVVNCVGGMDARREQRAL
NFGAHIVVGTPGRLRDHIERGHLDLSELKVAVLDEADEMLDMGFREDLEFILDAAPAERR
TLLFSATLARDIIALAKNYQNDALRIDTIDRNEPHRDIEYRAVRVAPNETEHAVVNLLRY
FESPGALVFANTRESVRSLHSKLRERGFDVVGLSGELSQRERADALQALRDGHARVCVAT
DVAARGLDLPDLGLVIHAELPVNKATLLHRSGRTGRAGKKGVSALVVPYTRRRKAEQLLF
AAGVEGVWGGAPSADEIRAKDTERLLDDPIFAEASNEEDLALAEAMLAKRTPTEIAAALI
RTRRAKLPAPEEIYDDPRHGADPGPRSREPREPRDFGDRPEREPRASMDGSEWFRISVGR
RGNADPKWLIPLICRQGHITKKDIGSIRIFDYDTKFEISAEAAVKFGAAVQATVREDVSI
TPTTAPAPRGDAPRAPRPPRNYDDAPRGPRANAPGSRDHTPRPGGYDRDGMSGAKPYGRG
EEPKGDYKARPPRDAKPRDFKPRDRDEAPRPYSPVDSDGAPKRAYKPRAEGRDNADGPRE
YKPRAPKAFGDAPAKPYKAKPAFGDKPAFKGPKPFKGKSDFGGKPKPFKKK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccccgcctcccaccccgctcttgagcgggctctcgccgctcagggttacgcc
gagcccacccccgtccaggccgccgtgctggaagccgacgccgaaggccgcgacctgctg
gtcagcgcccagaccggctcgggcaagaccgtggccttcggcctggccgccgccccgacc
ctgctgggcgacgccgagcgcctgcccaaggccggcctgccgatgtgcctggtcatcgcc
ccgacccgtgaactggccatgcaggtcaatcgcgaactggagtggctctacgcccaggcc
ggcgccacggtcgtcaactgcgtcggcggcatggacgcccgccgcgagcaacgcgccctg
aacttcggtgcccacatcgtcgtcggcacgccgggtcgcctgcgcgaccacatcgagcgc
ggccacctggacctctccgagctgaaggtcgccgtcctcgacgaagccgacgaaatgctc
gacatgggcttccgcgaggacctggagttcatcctcgacgccgccccggccgagcgtcgc
accctgctgttctcggccaccctggcgcgcgacatcatcgccctggccaagaactaccag
aacgacgccctgcgtatcgacacgatcgaccgcaacgagccgcaccgcgacatcgagtac
cgcgccgtgcgcgtggcgccgaacgagaccgaacacgcggtggtcaacctgctgcgctac
ttcgagagccctggcgccctggtgttcgccaacacccgcgagagcgtgcgttcgctgcac
agcaagctgcgcgagcgcggcttcgacgtcgtgggcctgtcgggcgaactttcgcagcgc
gagcgcgccgacgcccttcaagctctccgtgacggccacgcccgcgtctgcgtggccacc
gacgtcgccgcgcgcggcctggatctgcccgacctgggcctcgtcatccacgccgaactg
ccggtcaacaaggccacgctgctgcaccgttcgggccgcaccggtcgcgccggcaagaag
ggcgtctcggcgctcgtcgtgccctacacccgtcgccgcaaggccgagcagctgctgttc
gcggccggcgtcgaaggcgtctggggcggtgccccgagcgccgacgagatccgcgccaag
gacaccgagcgcctgctggacgatccgatcttcgccgaagcttcgaacgaggaagacctg
gccctggccgaggccatgctggccaagcgcaccccgaccgagatcgccgccgccctgatc
cgcacccgccgcgccaagctgcctgccccggaagagatctacgacgacccgcgccacggc
gccgatccgggcccccgctcgcgtgaaccgcgcgagccccgcgacttcggcgatcgtccg
gaacgcgagccgcgcgccagcatggacggctcggagtggttccgcatcagcgtcggccgc
cgcggcaacgccgatcccaagtggctgatcccgctgatctgccgccaaggccacatcacc
aagaaggacatcggctcgatccggatcttcgactacgacaccaagttcgagatctcggcc
gaggcggcggtaaagttcggcgccgctgtgcaggccacggtgcgcgaggacgtctcgatc
acgccgaccacggccccggctccgcgcggcgatgctccgcgcgcgccgcgtccgccccgc
aactacgacgacgccccgcgcggtccccgcgccaacgccccgggttcgcgcgaccacact
ccgcgtcccggcggctacgaccgcgacggcatgagcggcgccaagccgtatggccgcggc
gaggagcccaagggcgactacaaggcgcgccccccgcgtgacgccaagccgcgcgacttc
aagccccgcgatcgcgacgaagctccgcgtccctactcgccggtcgacagcgacggcgcc
cccaagcgcgcctacaagccccgcgccgaaggccgcgacaacgccgacggcccccgcgag
tacaagccccgcgcgcccaaggcgttcggcgacgctccggccaagccctacaaggccaag
ccggcgttcggcgacaagcccgcgttcaagggccccaagcccttcaagggcaagagcgac
ttcggcggcaagcccaagccgttcaagaagaagtag
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