Caulobacter flavus: C1707_22210
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Entry
C1707_22210 CDS
T05702
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cfh
Caulobacter flavus
Pathway
cfh03410
Base excision repair
cfh03430
Mismatch repair
cfh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1707_22210 (recJ)
03430 Mismatch repair
C1707_22210 (recJ)
03440 Homologous recombination
C1707_22210 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfh03400
]
C1707_22210 (recJ)
DNA repair and recombination proteins [BR:
cfh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C1707_22210 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C1707_22210 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C1707_22210 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AYV48753
UniProt:
A0A2N5CQL3
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All DBs
Position
complement(4895689..4897509)
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AA seq
606 aa
AA seq
DB search
MAADGHAVPAAAEAFLGVERSLSGRAWRERPADAAVSRDIARLHGLSEPLARALAARGIT
LDGARDYLQPTLKSLFPDPSSFTDMDRAAEILVDALEQGRPTMVFADYDVDGATSAAQLV
RWFRHMGVELPIYIPDRLKEGYGPSPAAFKTIRDTGAELVVTLDCGAAAYDAIASAATIG
LEVVVIDHHLMREDPPAAAAVVNPNRPGCQSGQGVLAAAGVTFVLLVALNREARKRGLFG
EGRPEPDLRQWLDLTALGEVCDVTQLVGFNRSLTATGLRVMSSWANPGLKALLEVAKGQG
AASVFHAGFILGPRINAGGRIGRSDLGARLLSTDDPIEARALAEELDALNTERKAVEAAV
VEEAVAILERSSNFDPNAPVIVVAGDDWHPGVVGIVASRLRERYRKPTLVIGIDRAAGIA
KGSGRSQPGVNLGRAVQAAFEAGILMAGGGHAMAAGLTVRPDSIPELRAFLEEALAGEME
AVGAESVEVDALVQPRAANRGLWTEFQQMAPFGPGNVEPTFALASVRPERVMALRGGHVR
VDLVGPSGDRIKAVSWRSAETDLGRRLLAGGGALHVVGRLKPDDYMGREGVQLEIEDAAD
PRMWTE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacggtcatgccgttcccgccgccgccgaggccttccttggcgtcgagcgc
tcgctgtcgggccgcgcctggcgcgagcgtcccgccgacgccgcggtctcccgtgacatc
gcccgcctgcacggcctgtccgagccgctggctcgcgccctggcggcgcggggaatcact
ctggacggcgcgcgcgactacctgcagccgaccctgaagtcgctgtttcccgatccttcc
agcttcaccgacatggaccgggccgccgagatcctggtcgacgccctggagcaggggcgg
cccaccatggtgttcgccgactacgacgtcgacggcgccaccagcgccgcccagctggtc
cgctggttccggcacatgggcgtcgagctgccgatctacattcccgaccgcctgaaggag
ggctacgggccaagtccggcggccttcaagaccatccgcgacacgggcgcggaactggtc
gtcacgctggactgcggcgcggccgcctacgacgccatcgccagcgccgccacgatcggg
ctggaggtggtggtcatcgaccaccacctgatgcgcgaggacccgccggccgccgcggcc
gtagtcaatcccaaccggccgggctgccagagcgggcagggcgtgctggccgccgccggc
gtgaccttcgtcctcctggtcgccctcaatcgcgaggcgcgaaagcgcggcctgttcggg
gaggggcggcccgagcctgacctgcgccagtggctggacctgacggccctgggcgaggtc
tgcgacgtcacccagctggtgggcttcaatcgttcgctgacggccaccggcctgcgggtg
atgtcgagctgggccaatcccggtctcaaggccctgctggaggtcgccaaggggcagggg
gcggccagcgtcttccatgccggcttcatcctgggcccccgaatcaacgccggcggccgc
atcggccgctcggatctcggggcgcggctgctctcgaccgacgatccgatcgaggcgcgg
gcgctggccgaggagctcgacgccctcaacaccgagcgcaaggccgtcgaggccgccgtg
gtcgaggaggccgtggcgattctcgaacgcagcagcaatttcgatcccaacgcgccggtc
atcgtcgtggcgggcgacgactggcaccccggcgtcgtcggcatcgtcgccagtcgcctg
cgcgagcgctatcgcaagccgacgctcgtcatcggcatcgaccgggcggcgggaatcgcc
aagggctcggggcgttcgcagcccggcgtgaacctggggcgggcggtgcaggcggccttc
gaggccggcatcctgatggccggcggcgggcacgccatggccgcgggcctgaccgtgcgg
cccgattcgattcccgagctgcgcgccttcctggaggaggccctggccggcgagatggag
gccgtcggcgccgagtcggtcgaggtcgacgccctggtgcagcccagggccgccaatcgc
ggcctctggaccgagttccagcagatggcgccgttcggtcccggcaatgtcgagccgacc
ttcgcgctggccagcgtgcggcccgaacgggttatggccctgcgcggcggccacgtgcga
gtcgacctcgtcggcccctctggcgatcgcatcaaggccgtttcctggcgctcggccgag
accgatcttggccgccggctgctggcgggcggcggcgcgctgcatgtcgtgggacgcctg
aaacccgacgattacatgggccgcgaaggggtccagctcgagatcgaggacgccgccgac
ccgcgcatgtggacggaataa
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