Cellulomonas fimi: Celf_1234
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Entry
Celf_1234 CDS
T01490
Name
(GenBank) HhH-GPD family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cfi
Cellulomonas fimi
Pathway
cfi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Celf_1234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfi03000
]
Celf_1234
03400 DNA repair and recombination proteins [BR:
cfi03400
]
Celf_1234
Enzymes [BR:
cfi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Celf_1234
Transcription factors [BR:
cfi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Celf_1234
DNA repair and recombination proteins [BR:
cfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Celf_1234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AEE45369
UniProt:
F4H417
LinkDB
All DBs
Position
complement(1342798..1343634)
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AA seq
278 aa
AA seq
DB search
MATPVRLDVPLDPAPLLASLTAHAVPGVETVDGAEVTRAVVLGGRATLVTARLTDDRVEV
RGDAPDPALRAVATRWFGLDDDLAAVVDALGPDRVVGPLVRRRPHLRVLGHLDGFEATLT
TVLGQQVSLAAARTFSGRLAAAWGEPGPDGFLLFPRPETIAALDPDEVQRTVRVTGARAR
ALHAVATAFAEGLDLGPDVDRVEARRRLHALSGVGPWTVEYLALRVLADRDALPGGDVVL
RRALGADGTRAVEAAAQAWRPWRAYAAVHLWTAHAFAL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtggccacgcccgtccggctcgacgtgccgctcgaccccgcccccctgctggcgtccctc
acggcgcacgcggtccccggcgtcgagaccgtggacggtgccgaggtgacgcgcgcggtc
gtgctcggcggccgcgcgaccctcgtcacggcgcggctgacggacgaccgcgtcgaggtg
cggggcgacgcaccggacccggccctccgagccgtcgccacgcgctggttcggcctcgac
gacgacctggccgcggtcgtcgacgcgctcgggcccgaccgcgtggtcggaccgctcgtg
cgccgccggccgcacctgcgggtgctcgggcacctcgacgggttcgaggcgacgctgacg
accgtgctgggccagcaggtgtcgctcgccgcggcgcgcaccttctccgggcggctcgcc
gcggcgtggggagagcccggcccggacgggttcctgctgttcccccggccggagacgatc
gccgcgctcgaccccgacgaggtgcagcgcaccgtgcgggtcacgggcgcccgggcgcgg
gcgctgcatgccgtggcgacggcgttcgccgaagggctggacctgggtcccgacgtggac
cgcgtcgaggcgcggcgccggctgcacgcgctgtcgggggtcgggccctggacggtcgag
tacctcgcgctgcgggtcctggccgaccgcgacgccctgcccggtggcgacgtggtgctc
cggcgggccctgggcgccgacgggacgcgtgcggtcgaggcggccgcgcaggcgtggcgc
ccgtggcgcgcctacgccgcggtgcacctgtggacggcccacgcgttcgccctgtga
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