Cellulomonas fimi: Celf_1340
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Entry
Celf_1340 CDS
T01490
Name
(GenBank) Pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
cfi
Cellulomonas fimi
Pathway
cfi00040
Pentose and glucuronate interconversions
cfi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Celf_1340
Enzymes [BR:
cfi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Celf_1340
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
RicinB_lectin_2
Ricin_B_lectin
Beta-tre_PLH30
Motif
Other DBs
NCBI-ProteinID:
AEE45475
UniProt:
F4H4Z5
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All DBs
Position
complement(1463945..1465264)
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AA seq
439 aa
AA seq
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MTSRPTTRRARQVVALAVTGVLAAATAIAVAPAASAATPDGGASYVLVSRKSGKVVDVKG
ASTSDGAAAVTATRTDAASQQWSFVSVGSGWYELHNRASGKVLGVASASTSDGAALVQQT
DQSSTAQQFSIAAQSDYVRLVNRGSGKAVSIAGASTSAGAAVVQLTDGKSYHQQWELVKV
GATGTPAPTTSSTPRPTTSATPKPTTQPTSTPGSFPAWPTAKGEKKVSSTITVTGTLDGG
MVRHYGISAGGQSESQPPMFKLENGAVLKNVILGTGAGDGVHCTGTCTLENVWWEDVEED
AATFKGTASSQVMTVNGGGARSASDKVFQHNGPGTFVITNFQVSSFGKLYRSCGNCSKQY
ARTVVVDNVQVTAPGKSLVGINPNLGDKATITDVTIIGDSSKKISICDAYKGVTSGEPSK
TGSGPSAACGYSTSSITYK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccgcccgaccacgcgccgcgcccggcaggtcgtcgcactcgccgtcaccggt
gtgctcgccgccgcgaccgcgatcgcggtcgcccccgccgcgtccgcggccacgcccgac
ggtggcgcgtcctacgtcctcgtcagccgcaagagcggcaaggtcgtcgacgtcaagggc
gcctcgacgtccgacggcgccgcggccgtgacggccacgcgcacggacgccgcgtcccag
cagtggagcttcgtgagcgtcggcagcggctggtacgagctgcacaaccgcgcctcgggc
aaggtcctcggcgtggcgtcggccagcacgtccgacggtgccgccctcgtccagcagacg
gaccagagcagcacggcgcagcagttctcgatcgccgcgcagagcgactacgtgcgcctg
gtcaaccgcggctccggcaaggccgtctcgatcgccggcgcgtcgacgtcggcgggtgcg
gcggtcgtccagctcaccgacggcaagtcgtaccaccagcagtgggagctcgtgaaggtc
ggcgccaccggcacgcccgcacccacgacgtcgtccacgcccaggccgacgaccagcgcg
acgccgaagcccacgacgcagcccacgtcgacccccggctccttccccgcctggccgacg
gccaagggcgagaagaaggtgtcgagcaccatcacggtgacgggcacgctcgacggcggc
atggtccgccactacggcatctcggccggcggtcagagcgagtcgcagccgccgatgttc
aagctcgagaacggggccgtgctgaagaacgtcatcctcgggaccggcgcgggtgacggc
gtgcactgcaccggcacctgcacgctcgagaacgtctggtgggaagacgtcgaggaggac
gcggcgacgttcaagggcacggcctcgtcgcaggtcatgaccgtcaacggcggcggcgcc
cggtcggcgtccgacaaggtcttccagcacaacggcccgggcacgttcgtcatcacgaac
ttccaggtctcgagcttcggcaagctctaccgctcgtgcggcaactgctccaagcagtac
gcccgcaccgtcgtcgtcgacaacgtccaggtcaccgcacccggcaagtccctcgtcggg
atcaacccgaacctcggcgacaaggcgacgatcaccgacgtgacgatcatcggcgactcc
tcgaagaagatctccatctgcgacgcgtacaagggcgtcacgtccggcgagccgtcgaag
accggttccgggccgtccgcggcctgcgggtactcgacctcgtcgatcacctacaagtga
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