Cellulomonas fimi: Celf_1390
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Entry
Celf_1390 CDS
T01490
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cfi
Cellulomonas fimi
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfi03032
]
Celf_1390
03400 DNA repair and recombination proteins [BR:
cfi03400
]
Celf_1390
Enzymes [BR:
cfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Celf_1390
DNA replication proteins [BR:
cfi03032
]
Prokaryotic type
DNA Topoisomerases
Celf_1390
DNA repair and recombination proteins [BR:
cfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Celf_1390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
VinK_C
Motif
Other DBs
NCBI-ProteinID:
AEE45525
UniProt:
F4H5S5
LinkDB
All DBs
Position
complement(1513931..1514932)
Genome browser
AA seq
333 aa
AA seq
DB search
MVRLRRVRIDAPGWTRRRAGKGFVYLDVERVRITDEEHLERIVGLAIPPAWRDVWISPWP
NGHIQAAGLDDAARRQYLYHQQWRRRRDRLKHDHVLDVARRLPAARRHVERDLALPGMPR
QKVLALAFRLLDLAYLRVGGEGYAQRHGSYGLATLRKDHVRVLPPESPDDAGRVHLHFPA
KSGQVRDTVVEDDTVAELVRVLVRRRDDMDDLLAWRDDDGEWHDVTSVDVGQYVKQRLGG
DASAKDFRTWHATVLAARALATAGPPPRSDRARRRVVTQAVKAVAEELGNTPAVCRASYI
DPRVVDLWEHGTTIRPTRSQRVAERETLRLLGG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgactccgccgcgtccgcatcgacgcccccggctggacccgccgccgcgcgggc
aagggcttcgtgtacctggacgtcgagcgcgtgcggatcaccgacgaggagcacctcgag
cggatcgtcgggctcgcgatcccgcccgcctggcgcgacgtgtggatcagcccctggccc
aacgggcacatccaggcggcgggactcgacgacgcggcgcgccgccagtacctgtaccac
cagcagtggcggcggcgccgcgaccggctcaagcacgaccacgtgctcgacgtcgcgcgc
cgcctgcccgccgcccgtcggcacgtcgagcgggacctggcgctgcccgggatgccccgg
cagaaggtgctggccctcgcgttccggctgctcgacctcgcgtacctgcgcgtcggcggc
gagggctacgcccagcggcacgggtcgtacgggcttgcgacgctgcgcaaggaccacgtc
cgcgtcctgccgccggagtcgcccgacgacgccggccgcgtgcacctgcacttccccgcc
aagtcgggccaggtgcgcgacaccgtcgtcgaggacgacacggtcgcggagctcgtccgc
gtcctcgtgcgacgcagggacgacatggacgacctgctcgcgtggcgcgacgacgacggc
gagtggcacgacgtcacgagcgtcgacgtcgggcagtacgtcaagcagcggctcggtggg
gacgcctccgcgaaggacttccggacgtggcacgcgaccgtgctcgcggcgcgggctctc
gcgacggccggtccgccgccccgcagcgaccgtgcacggcgccgtgtcgtgacgcaggcg
gtcaaggcggtcgcggaggagctcggcaacacccccgcggtgtgccgggcgtcgtacatc
gacccgcgcgtcgtcgacctctgggagcacggcacgacgatccgtccgacccgctcgcag
cgcgtcgcggagcgcgagacgctccgcctgctgggcggctga
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