Cellulomonas fimi: Celf_1627
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Entry
Celf_1627 CDS
T01490
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cfi
Cellulomonas fimi
Pathway
cfi03030
DNA replication
cfi03430
Mismatch repair
cfi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Celf_1627
03430 Mismatch repair
Celf_1627
03440 Homologous recombination
Celf_1627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfi03032
]
Celf_1627
03400 DNA repair and recombination proteins [BR:
cfi03400
]
Celf_1627
Enzymes [BR:
cfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Celf_1627
DNA replication proteins [BR:
cfi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Celf_1627
DNA repair and recombination proteins [BR:
cfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Celf_1627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
MCM10_OB
DUF655
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AEE45759
UniProt:
F4H7S5
LinkDB
All DBs
Position
1782153..1785692
Genome browser
AA seq
1179 aa
AA seq
DB search
MSSAGGSDFVHLHVHTEYSMLDGAARLGELFEEVQRQGQTAIATTDHGYLFGAFDFWSKG
TAAGVKPIIGVEAYLTPGTSRFDQTRVRFGQQGQEADDVSARGAYTHMTMLARNNEGLHN
LFRASSLASLEGQMGKWPRMDRDLLETYGKGLIATTGCPSGEIQTRLRLGQWDEAVRVAG
ELQDIFGKEYFYVELMDHGIDIETRVLKDLLRLSETIGAPLVATNDLHYTRQEDSASQEA
LLAINSGSTLSDPDRFKFDGDGYYVKSAAEMRRIWAELPEACDNTLRIAEQCEVSFNTSA
NYMPNYPVPPGEDETSWFVKEVEKGLHVRYPGGIPDDVRKQAAYETEVITQMGFPGYFLV
VADFINWAKDHGIRVGPGRGSGAGSMAAYAMRITDLDPLQHGLIFERFLNPDRVSMPDFD
VDFDERRRGEVIRYVTDKYGEDRVAQIVTYGTIKAKQALKDSARLLGMPFAMGEKLTKAM
PPAIMGKDISLTGIFDPADKRYHEAEEFRQVHATDPEAQRVVELAKGIEGLKRQWGVHAA
GVIMSSDPLIDIIPIMRRPQDGAVITQFDYPTCEGLGLIKMDFLGLRNLTILDDALDNIV
ANGKDPLVLEELELTDRKTYEMLGRGDTLGVFQLDGGGMRTLLRLMRPDNFEDISAVGAL
YRPGPMGANSHTNYALRKNGAQEVTPIHPELAEALEDILGTTYGLIVYQEQVMAIAQRVA
GYSLGQADILRRAMGKKKKSELDKQFAGFSAGMQERGFSMAAVQTLWDILLPFSDYAFNK
AHSAAYGVVSYWTAYLKANYPVEYMAALLTSVKDDKDKSALYLGECRHMGITVLPPDVNS
SAANFTAVGADIRFGLTAVRNVGANVVDAIVRTREEKGAFTSFTDFLEKVPAVVCNKRTI
ESLIKAGAFDSLGHPRRALLLVHEQAVDSVIGVKRKEAEGQFDLFADLMGGDDAGPGFAV
AIPDLPDWDKKQRLAFEREMLGLYVSDHPLSGIEHVLAASADVSIATLLADEARPDGSTV
VIAGLVTSLQRKMSKQGNPWAAVTIEDMEGSVEVMFFGETYLAYSTVLAEDAVVVVKGRV
RRRDESMQLQAMEVSLPDVSQVADAPVVVSLAVSRCTQPLVERLREVLATHPGITEVHLR
LTQPGRATVMRLGDGLRVERSPSLFGDLKALLGPSCLAS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgctggaggctccgacttcgtccacctccacgtgcacaccgagtactcgatg
ctcgacggtgcggcccgcctcggggagctgttcgaggaggtgcagcgacaggggcagacc
gccatcgcgacgacggaccacggctacctgttcggcgcgttcgacttctggtcgaagggc
accgcggccggggtcaagccgatcatcggcgtcgaggcgtacctcacgccggggaccagc
cggttcgaccagacgcgcgtgcggttcggccagcaggggcaggaggccgacgacgtctcg
gcgcgcggcgcgtacacgcacatgacgatgctggcccggaacaacgagggcctgcacaac
ctgttccgggcgtcgtcgctcgcgtcgctcgagggccagatgggcaagtggccccggatg
gaccgggacctgctcgagacgtacggcaagggcctcatcgcgacgacgggctgcccgtcg
ggggagatccagacgcgcctgcggctcggccagtgggacgaggccgtccgggtggcgggc
gagctgcaggacatcttcggcaaggagtacttctacgtcgagctgatggaccacggcatc
gacatcgagacgcgcgtcctgaaggacctgctgcgcctgtcggagaccatcggtgcgccg
ctcgtcgcgaccaacgacctgcactacacgcgccaggaggactcggcgtcgcaggaggcg
ctgctcgcgatcaactcgggctcgacgctctcggacccggaccggttcaagttcgacggc
gacggctactacgtgaagtcggccgccgagatgcgacgcatctgggcggagctgcccgag
gcgtgcgacaacacgctgcgcatcgccgagcagtgcgaggtgtcgttcaacacctccgcg
aactacatgccgaactaccccgtgccgcccggcgaggacgagacgagctggttcgtcaag
gaggtcgagaagggtctgcacgtccggtacccgggcggcatcccggacgacgtccgcaag
caggccgcgtacgagaccgaggtcatcacgcagatgggcttcccggggtacttcctcgtg
gtcgccgacttcatcaactgggccaaggaccacggcatccgcgtgggtccgggccgtggg
tccggtgcgggctcgatggccgcgtacgcgatgcggatcacggacctcgacccgctgcag
cacggcctgatcttcgagcggttcctcaacccggaccgcgtctcgatgcccgacttcgac
gtcgacttcgacgagcgccggcgcggcgaggtcatccggtacgtgaccgacaagtacggc
gaggaccgcgtcgcgcagatcgtcacgtacggcaccatcaaggcgaagcaggccctcaag
gactccgcgcggctgctcggcatgccgttcgcgatgggggagaagctcaccaaggcgatg
ccgcccgcgatcatgggcaaggacatcagcctcacgggcatcttcgacccggccgacaag
cggtaccacgaggcggaggagttccgtcaggtccacgcgaccgacccggaggcgcagcgc
gtcgtcgagctcgccaagggcatcgagggcctgaagcggcagtggggcgtgcacgcggcg
ggcgtcatcatgtcgagcgacccgctcatcgacatcatcccgatcatgcgccgcccgcag
gacggcgcggtcatcacgcagttcgactaccccacgtgtgagggcctcggcctgatcaag
atggacttcctcgggctgcggaacctcacgatcctcgacgacgcgctcgacaacatcgtc
gcgaacggcaaggaccccttggtgctcgaggagctcgagctcacggaccgcaagacgtac
gagatgctcggccggggcgacaccctgggcgtgttccagctcgacggcggcggcatgcgg
acgctgctgcggctcatgcgccccgacaacttcgaggacatctccgcggtcggcgcgctc
taccgcccgggcccgatgggtgcgaactcgcacaccaactacgcgctgcgcaagaacggc
gcgcaggaggtcacgccgatccaccccgagctcgccgaggcgctcgaggacatcctcggc
acgacgtacggcctgatcgtctaccaggagcaggtcatggcgatcgcgcagcgcgtcgcc
gggtactcgctcggtcaggccgacatcctgcgccgcgcgatgggcaagaagaagaagtcc
gagctggacaagcagttcgcgggcttctcggcgggcatgcaggagcgcggcttctcgatg
gccgccgtccagacgctgtgggacatcctcctgccgttctccgactacgccttcaacaag
gcgcactccgcggcgtacggcgtcgtctcgtactggaccgcgtacctcaaggcgaactac
ccggtcgagtacatggccgccctgctcacgtcggtcaaggacgacaaggacaagtcggcc
ctgtacctgggcgagtgccggcacatgggcatcacggtcctgccgcccgacgtgaactcg
tcggccgcgaacttcacggccgtgggtgccgacatccgcttcggcctgaccgcggtgcgc
aacgtcggcgcgaacgtcgtcgacgcgatcgtgcgcacgcgcgaggagaagggcgcgttc
acgtccttcaccgacttcctcgagaaggtccccgccgtcgtctgcaacaagcggaccatc
gagtcgctcatcaaggcgggcgcgttcgactcgctcggccacccgcgccgtgcgctgctg
ctcgtgcacgagcaggccgtcgactccgtcatcggcgtcaagcgcaaggaggccgagggg
cagttcgacctgttcgccgacctcatgggcggcgacgacgccggccctggctttgcggtc
gccatccccgacctgcccgactgggacaagaagcagcggctcgcgttcgagcgcgagatg
ctcggcctgtacgtgtccgaccacccgctgtccggcatcgagcacgtcctcgcggcgtcc
gccgacgtgtcgatcgcgacgctcctggcggacgaggcgcgccccgacgggtcgaccgtc
gtgatcgccggcctggtcacctcgctgcagcgcaagatgtccaagcagggcaacccgtgg
gccgccgtgacgatcgaggacatggagggctccgtcgaggtcatgttcttcggcgagacg
tacctcgcgtactcgacggtgctggccgaggacgccgtggtcgtggtcaagggccgcgtg
cgccggcgcgacgagtcgatgcagttgcaggccatggaggtgtcgctgcccgacgtgtcg
caggtcgcggacgcgccggtcgtcgtgtcgctcgcggtgtcgcggtgcacgcagcctctc
gtcgaacgcctgcgcgaggtcctcgcgacccacccgggcatcaccgaggtgcacctgcgg
ctcacgcagcccgggcgggcgaccgtcatgcgtctgggcgacggcctgcgcgtcgagcgg
tcgccgtcgctgttcggcgacctcaaggccctgctcgggccgagctgcctggcgagctga
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