Cellulomonas fimi: Celf_1928
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Entry
Celf_1928 CDS
T01490
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
cfi
Cellulomonas fimi
Pathway
cfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Celf_1928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfi03019
]
Celf_1928
03009 Ribosome biogenesis [BR:
cfi03009
]
Celf_1928
Messenger RNA biogenesis [BR:
cfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Celf_1928
Ribosome biogenesis [BR:
cfi03009
]
Prokaryotic type
rRNA helicases
Celf_1928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEE46058
UniProt:
F4GZL4
LinkDB
All DBs
Position
complement(2137206..2138996)
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AA seq
596 aa
AA seq
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MSALVPPALLPDDSAADVVTPVDGPTFATLGLPAPLERAVADLGFVTPSAIQSQAVPALL
AGRDIVGVAQTGTGKTAAFGLPLLAAVDAGTAGVQAIVLTPTRELAMQVADAITSFATHL
PGLAVVAVYGGSPFLPQQRAIARGAQVVVGTPGRVLDHLDRGTLVLDQVRYLVLDEADEM
LRMGFAEDVDRVLASTPDRRQVALFSATMPAPIRRVAEQHLHQPVEITVARQSSTVTTVR
QTYAVVPYRHKIGALGRVLAVTDADATIVFVRTRGAAEEVGSALVERGISAAHISGDVAQ
SDREKIVDRLRSGALDVLVATDVAARGLDVERIGLVVNFDVPREAETYVHRIGRTGRAGR
EGVALSFVTPAEQSRLRTIERTTRVTLEQVPIPTPAEVSAHRVALLLGRTPARAELGRLD
VYREAVAAHLAAHPGTDPIELLAAVTALAVGDEGPTPRDGDDLDDALERARLTPGRHERV
GGDDRPPRERRRAETHIAGGPPRWRVAVGHRDGLQPGALVGALTGEGGLTGKDVGKIDIF
GSFALVDIPGGLSADVVDRLSRTRVAGRPLRIRVDTGPRPGHGASRPSHGPQRGRH
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccctcgtgccccctgccctcctgcccgacgactccgccgccgacgtggtcacg
cccgtcgacggccccacgttcgcgacgctcggtctgcccgcgccgctcgagcgcgccgtc
gccgacctcggcttcgtgacgccgtccgcgatccagtcgcaggccgtgcccgccctgctc
gccgggcgtgacatcgtcggcgtcgcccagaccggcaccggcaagaccgccgccttcggc
ctcccgctgctcgccgcggtcgacgccggcaccgcgggcgtgcaggcgatcgtcctgacc
ccgacgcgcgagctcgccatgcaggtggccgacgcgatcacgtccttcgcgacgcacctg
cccgggctggccgtcgttgccgtctacggcgggtcgcccttcctcccgcagcagcgggcc
atcgcgcgcggcgcgcaggtcgtcgtcgggacgccggggcgtgtgctcgaccacctcgac
cgcggcaccctcgtgctcgaccaggtgcggtacctcgtgctcgacgaggccgacgagatg
ctccgcatgggcttcgcggaggacgtcgaccgcgtgctcgcctcgacgcccgaccggcgt
caggtcgcgctgttctcggcgaccatgcccgcgcccatccggcgcgtcgcggagcagcac
ctgcaccagcccgtcgagatcacggtcgcgcggcagtcctcgacggtcacgacggtccgc
cagacgtacgcggtcgtgccgtaccggcacaagatcggcgcgctgggccgtgtcctggcg
gtgaccgacgccgacgccacgatcgtcttcgtgcggacccgaggtgcggccgaggaggtc
ggcagcgccctcgtcgagcgcggcatctccgcggcgcacatctccggcgacgtcgcgcag
tcggaccgggagaagatcgtcgaccggctgcgctccggggcgctcgacgtgctcgtcgcg
accgacgtcgccgcgcgcggcctcgacgtcgagcgcatcggtctcgtcgtcaacttcgac
gtgccgcgcgaggcggagacgtacgtgcaccgcatcggtcgcacgggccgcgcagggcgc
gagggggtcgcgctgtcgttcgtcacccccgccgagcagtcgcggctgcgcacgatcgag
cgcacgacccgggtgacgctcgagcaggtcccgatcccgacgccggccgaggtgagcgcg
caccgcgtcgcgctgctgctcgggcggacgccggcccgggccgagctcggtcgcctcgac
gtctaccgcgaggccgtcgccgcacacctggccgcgcaccccggcaccgacccgatcgag
ctgctcgcggccgtgacggcgctcgccgtcggcgacgagggccccaccccgcgtgacggc
gacgacctggacgacgcgctcgagcgcgcccggctcaccccgggccgtcacgagcgggtc
ggcggcgacgaccggcccccgcgtgagcggcgccgcgccgagacgcacatcgcgggcggc
ccgccgcgctggcgggtcgcggtcggtcaccgcgacggcctgcagcccggggcgctcgtc
ggggcgctcacgggcgagggcggcctgaccggcaaggacgtcggcaagatcgacatcttc
ggcagcttcgcgctcgtcgacatcccgggcgggctgtcggccgacgtcgtcgaccgcctg
tcgcgcacgcgtgtcgccggacggccgctgcgcatccgtgtcgacaccggcccgcgcccc
gggcacggggcgtcccgcccctcgcacggcccgcagcgcggccggcactga
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