Cellulomonas fimi: Celf_1950
Help
Entry
Celf_1950 CDS
T01490
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cfi
Cellulomonas fimi
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfi03019
]
Celf_1950
Enzymes [BR:
cfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Celf_1950
Messenger RNA biogenesis [BR:
cfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Celf_1950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEE46080
UniProt:
F4GZN6
LinkDB
All DBs
Position
complement(2157623..2160436)
Genome browser
AA seq
937 aa
AA seq
DB search
MAVTEPSPAERYAAARRRAEVERGELAQFRELLAFPLDDFQADACAALERGSGVLVAAPT
GAGKTVVGEFAVHLALSAGRKAFYTTPIKALSNQKYADLVRRYGPDRVGLLTGDTTINGD
APVVVMTTEVLRNMLYAGSPTLLGLGFVVMDEVHYLADRFRGPVWEEVIIHLPDDVQLVS
LSATVSNAEEFGDWLATVRGDTAVVVSEHRPVPLGQHVLVRGDLLDLYAGHVDPTDPGVD
PPINPDLVQLLRRTDGPPVRRGPGDRGYRGRGGHRPGSGVGRPTPRFAVVDALDRDGLLP
AIVFIFSRAGCEGAVQQCLAAGVRLTDPAEQATIRRVVEERCAAVPPEDLDVLGYWDLLE
ALTRGVAAHHAGMLPLFKETVEDLFSRGLVKVVFATETLALGINMPARSVVLEKLVKWDG
SNHVDVTPGEYTQLTGRAGRRGIDTEGHAVVVAHPGLDPVQLAGLASKRLYPLRSSFRPT
YNMSVNLVAQVGRARAREVLETSFAQFQADRGVVGLARQAQSHAEALEGYAEAMRCHLGD
FGEYARIRRDITRLEREQSRAAAGARRAEAARSLEGLRVGDVLELPVGRRSGHAVVVDPG
GAGGFDGPRPTVLTTDRQVRRLTVADVGPGARTVGYLRVPKGFNVRVPAARRELAAALRS
SVDGAGADDGGPRRDGRRGRAGGRPTAAQDDAQIAALRRRLRAHPCHACPDRDEHARWAE
RWERLRGEHDALVRRIEGRTGSIAVVFDRICDVLARLGYVARTDDGLAVTDDGQWLRRLY
AENDLLLAECLRRGLWDELDPPQLAAAVSTLVYRSRREDQGEPRVPGGPASRLGVALDAT
VRAWSELEDLEAANRLETTVPLDLGLVEAVHRWSAGRSLDAVLRGAELSAGDFVRWCKQV
IDVLDQVAKAAPHERTRTTAARAVDSLRRGVVAYSSV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtgacggagccgtcgcccgccgagcggtacgcggccgcgaggcggcgcgccgag
gtcgagcgcggggagctcgcgcagttccgggagctgctcgcgttcccgctcgacgacttc
caggcggacgcgtgcgcggccctggagcggggcagcggcgtgctggtcgcggcccccacg
ggcgcgggcaagaccgtggtgggggagttcgcggtgcacctcgcgctgtccgcgggccgc
aaggcgttctacacgacgcccatcaaggcgctgtcgaaccagaagtacgcggacctggtg
cgccgctacggcccggaccgtgtggggctgctgacgggcgacacgacgatcaacggcgac
gcgcccgtcgtggtgatgacgaccgaggtcctgcgcaacatgctctacgcggggtcgccg
acgctgctcgggctcgggttcgtcgtgatggacgaggtgcactacctcgccgaccggttc
cgcggtccggtgtgggaggaggtcatcatccacctccctgacgacgtgcagctcgtgtcg
ttgtccgcgacggtgtcgaacgcggaggagttcggcgactggctcgcgacggtccgcggc
gacacggcggtcgtcgtcagcgagcaccggccggtccccctggggcagcacgtgctggtg
cgtggcgacctgctcgacctgtacgcgggtcacgtcgacccgacggatccgggtgtcgac
ccgccgatcaacccggacctcgtgcagctgctgcgccgcacggacggcccgccggtgcgc
cgcggaccgggcgaccgcggctaccgggggcgtggtggtcaccggcccggcagcggcgtg
gggcgcccgacgccccggttcgcggtggtcgacgcgctcgaccgcgacgggctgctgccc
gcgatcgtgttcatcttctcccgcgcggggtgcgagggtgccgtccagcagtgcctcgcg
gcgggtgtgcggctcacggaccccgccgagcaggcgacgatccgccgcgtcgtggaggag
cggtgcgctgccgtcccgccggaggacctcgacgtcctcggctactgggacctgctcgag
gcgctcacccgcggcgtcgcggcccaccacgccggcatgctgccgctgttcaaggagacc
gtggaggacctgttctcccgcggcctcgtgaaggtcgtgttcgcgaccgagaccctggcc
ctgggcatcaacatgcccgcgcggtccgtcgtgctggagaagctcgtcaagtgggacggg
tcgaaccacgtcgacgtgacaccgggggagtacacccagctcaccggccgggccggccgg
cgcggcatcgacaccgaggggcacgccgtcgtcgtcgcgcaccccggcctggaccccgtg
cagctcgccgggctcgcgtccaagcgcctgtacccgctgcggtccagcttccgcccgacg
tacaacatgtccgtcaacctcgtggcccaggtgggccgcgcccgcgcccgtgaggtgctc
gagacgtcgttcgcgcagttccaggcggaccgcggggtcgtcgggctggcacgccaggcc
cagtcgcacgccgaggcgctcgaggggtacgccgaggcgatgcgctgccatctcggggac
ttcggcgagtacgcccggatccgccgcgacatcacccggctcgagcgcgagcagtcccgg
gccgcggccggcgcccggcgcgccgaggcggcccgctccctggaggggctgcgcgtcggg
gacgtgctcgagctgcccgtggggcgccgctccgggcacgcggtcgtggtcgacccgggg
ggagcgggcgggttcgacggcccccgcccgacggtcctgacgaccgaccgtcaggtgcgc
cggctcacggtcgccgacgtcggccccggtgcgcgcaccgtcgggtacctgcgcgtcccg
aaggggttcaacgtccgcgtccccgcggcacggcgtgagctcgccgccgctctgcgctcg
tccgtcgacggggcaggcgccgacgacggcgggccccgccgcgacgggcgacgcggacgc
gcgggcggacgtccgacggccgcgcaggacgacgcgcagatcgccgctctgcgccggcgt
ctgcgcgcgcacccgtgccacgcgtgccccgaccgcgacgagcacgcccgctgggcggag
cggtgggagcggctgcgcggcgagcacgacgcgctggtccgccgcatcgagggacgcacc
gggtcgatcgcggtggtgttcgaccgcatctgcgacgtgctcgcacggctcgggtacgtc
gcccgcaccgacgacggcctggccgtgaccgacgacggccagtggctgcgccgcctgtac
gcggagaacgacctgctgctcgctgagtgcctgcgccgcggcctgtgggacgagctggac
ccgccgcagctcgccgccgccgtgtccacgctcgtgtaccgctcgcgccgcgaggaccag
ggcgagccgcgcgtccccgggggacccgcgagccggctcggtgtcgcgctcgacgcgacg
gtccgcgcctggtccgagctggaggacctcgaggcggcgaaccgcctggagacgaccgtc
ccgctcgacctcggcctggtcgaggcggtgcaccggtggtccgcgggccgcagcctcgac
gccgtgctgcgcggcgcggagctgtccgcaggcgacttcgtccggtggtgcaagcaggtg
atcgacgtgctcgaccaggtcgccaaggccgccccgcacgaacgcacgcgcaccaccgcg
gcccgcgccgtggactccctgcggcggggcgtggtcgcctactcgtcggtgtga
DBGET
integrated database retrieval system
