Cellulomonas fimi: Celf_2162
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Entry
Celf_2162 CDS
T01490
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
cfi
Cellulomonas fimi
Pathway
cfi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Celf_2162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfi03021
]
Celf_2162
Transcription machinery [BR:
cfi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Celf_2162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
CDC27
Motif
Other DBs
NCBI-ProteinID:
AEE46290
UniProt:
F4H1J1
LinkDB
All DBs
Position
complement(2399889..2401505)
Genome browser
AA seq
538 aa
AA seq
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MSSQTPHPALPREFEHPALQDLVLRGRTHGTVGAEELRSACEQADVQDAKRLRAVVRGLA
TAGIGVREPAVAAPTRAVAATSAKPRTSAKAVVARDEADGDAPAAKKTTSARAAAKPAAK
AAAGTKATATKAAPKAAAKAAPAKASKATAKDEDGGDEDIEDVDIEDVEIDEADAIEDVE
VEATAETPEESEDGDEETTEAAPAAKAEEESEDSGGFVYSDADDDDAPAQQVVTAGATAD
PVKDYLKQIGKVALLNAEQEVELAKRIEAGLFAEERLNAGVAMEPKLRRELEWIAGDGRR
AKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWW
IRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKV
VEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHQVLDTLSER
EAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcccagactccgcaccccgcgcttccgcgcgagttcgagcaccccgccctccag
gacctcgtcctgcgtgggcggacacatggcaccgtcggtgccgaggagctgcgttcggcc
tgcgagcaggcggacgtgcaggacgccaagcgtctgcgggccgtcgtccgcgggctcgcg
accgccggcatcggcgtgcgtgagccggccgtcgccgcgcccacccgggccgtcgccgcg
acgagtgccaagccgcgcacctccgccaaggccgtcgtcgcccgcgacgaggccgatggc
gacgctcccgccgcgaagaagacgacgtccgcgcgtgcggccgccaagccggcggcgaag
gccgcggcgggcaccaaggccaccgcgaccaaggctgcgccgaaggccgccgcgaaggcc
gcgcccgccaaggcgtcgaaggcgaccgccaaggacgaggacggcggcgacgaggacatc
gaggacgtcgacatcgaggacgtcgagatcgacgaggccgacgccatcgaggacgtcgag
gtcgaggccacggccgagacccccgaggagtccgaggacggcgacgaggagaccaccgag
gccgctcccgccgcgaaggcggaggaggagtccgaggactccggcggcttcgtctactcc
gacgcggacgacgacgacgcacccgcgcagcaggtcgtcacggccggcgccaccgccgac
cccgtcaaggactacctcaagcagatcggcaaggtcgcgctcctcaacgccgagcaggag
gtcgagctcgccaagcggatcgaggccggcctgttcgccgaggagcggctcaacgcgggc
gtcgcgatggagcccaagctgcgtcgtgagctcgagtggatcgccggtgacggccggcgc
gcgaagaaccacctgctcgaggcgaacctccggctggtcgtgtcgctcgccaagcgctac
acgggccgcgggatgctgttcctcgacctgatccaggagggcaacctcggcctgatccgt
gcggtcgagaagttcgactacaccaagggctacaagttctcgacgtacgccacctggtgg
atccgccaggcgatcacgcgcgcgatggccgaccaggcccgcaccatccgcatcccggtg
cacatggtcgaggtcatcaacaagctcgcccgcgtccagcggcagatgctccaggacctg
ggccgtgagcccacgccggaggagctcgccaaggagctcgacatgacccccgagaaggtc
gtcgaggtccagaagtacggccgcgagcccatctcgctgcacacgccgctcggtgaggac
ggcgacagcgagttcggcgacctcatcgaggactccgaggccgtcgtgcccgccgacgcg
gtgagcttcacgctcctgcaggagcagctgcaccaggtcctcgacacgctgtccgagcgg
gaggcgggcgtcgtctcgatgcgcttcggtctcaccgacggtcagccgaagacgctcgac
gagatcggcaaggtctacggcgtgacgcgcgagcgcatccggcagatcgagtccaagacg
atgtcgaagctgcggcacccgtcccgctcgcaggtgctgcgcgactacctcgactga
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