Cellulomonas fimi: Celf_2436
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Entry
Celf_2436 CDS
T01490
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cfi
Cellulomonas fimi
Pathway
cfi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Celf_2436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfi03400
]
Celf_2436
Enzymes [BR:
cfi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Celf_2436
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Celf_2436
DNA repair and recombination proteins [BR:
cfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Celf_2436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-ACC
OrfB_Zn_ribbon
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEE46562
UniProt:
F4H486
LinkDB
All DBs
Position
complement(2703970..2704878)
Genome browser
AA seq
302 aa
AA seq
DB search
MPELPEVETVRDGLARHVLGRTVTDVAVHRDYSVRRHVEGPLDFAGRLAGRRLDAAVRRG
KFLWLLLDDEDAALMAHLGMSGQLLVRSAQDLRDEVRHPHLRVRLALDDGSALDFVDQRT
FGHLSVPDLVPTPDGAPGGLGSGRAVVPAPVTHIARDLLDPSLDRPALVEAVRARRTGIK
RALLDQALVSGIGNIYADEGLWRARLHYARPTDTLRRAEVERALDGAQEVMTAALAQGGT
SFDALYVNVNGASGYFDRSLAVYGQAGRPCPRCGAAVRRDEFMNRSSYTCPVCQPRPRRA
RW
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctgcccgaggtcgagaccgtccgcgacgggctcgcgcggcacgtgctcggc
cggacggtcacggacgtcgcggtgcaccgcgactacagcgtccgccgtcacgtcgagggg
ccgctcgacttcgccggcaggctcgcggggcgccggctcgacgcggccgtccggcgcggc
aagttcctgtggctgctgctcgacgacgaggacgcggcgctcatggcgcacctcgggatg
agcggccagctcctcgtccgctcggcgcaggacctgcgcgacgaggtgcggcacccgcac
ctgcgggtccggctggccctcgacgacggctcggcgctcgacttcgtcgaccagcgcacg
ttcggccacctcagcgtgcccgacctcgtgccgacccccgacggcgccccgggcggcctc
gggtccgggcgtgcggtcgtccccgcgccggtcacgcacatcgcgcgcgacctgctcgac
ccgtcgctcgaccggcccgcgctggtcgaggccgtgcgggcccggcgcaccgggatcaag
cgcgcgctgctcgaccaggcgctcgtctccgggatcggcaacatctacgccgacgagggc
ctgtggcgcgcgcggctgcactacgcgcggcccacggacacgctgcgacgcgccgaggtc
gagcgcgcgctcgacggcgcgcaggaggtcatgacggccgcgctcgcgcagggcggcacg
agcttcgacgcgctgtacgtcaacgtcaacggcgcgtcggggtacttcgaccggtcgctc
gccgtctacgggcaggccgggcggccgtgcccgcgctgcggcgcagccgtgcgccgcgac
gagttcatgaaccgttcgtcgtacacgtgcccggtctgccagccgcgcccgcgccgcgca
cgctggtga
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