Cellulomonas fimi: Celf_2538
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Entry
Celf_2538 CDS
T01490
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cfi
Cellulomonas fimi
Pathway
cfi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Celf_2538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfi03400
]
Celf_2538
Enzymes [BR:
cfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Celf_2538
DNA repair and recombination proteins [BR:
cfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Celf_2538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AEE46663
UniProt:
F4H557
LinkDB
All DBs
Position
2822532..2825948
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AA seq
1138 aa
AA seq
DB search
MTAVRDTTDGTDAGAMHVHVAERADVLVEELARVLAEAPADPFTPDVVLVPTRGVERWVA
QRLSHRLGQAGGGDGVCANVRFSSPARAVADVLAAVVGAAPEDDPWAPEQLAWHVLGVLD
DHADDPLLAAPVHHLGARDDAMRQGRRFGLAQHVAHLLAAYDVQRPTVVRAWADGRDEDG
AGAPLPADLAWQAHLWRLVRARAAVPSPAQRIDEAVAMLASAPDTVSLPARLSVLGATRL
PDAHVRVLDALARHRDVHLWLPHPSLRLWERVGAASPPAGRRRDLPPVAEHPLLASMAGD
AVELQIRLRAVDAQVILHAAADPPATALGHLQRRLRADAAPTEAAAQRPVVDVGDRSVQV
HACHGRSRQVEVMREAVLGLLADDPSLEPRDVVVMCPDVEAFAPLVSAAFGAGSTGGTQW
EHPGRSLRVRVADRAPARANPLLAFISTLLDLAASRVTASAVVDLAGLAPVRHRFRLDDA
DLDRIRAWALESGVRWGEDVARRDRFRLGSVPQGTWSGALDRLLLGVAMAEEDQRYVGAV
LPVDDVGSTDVDLVGRLAELLDRLTAVLHALDGTRPATAWLDTLTAALDLLTDVAPADRW
QQVEALRVLGEVRTSAAQHDRDLRLPDVVAVLEPHLRGRPTRAGFRTGALTVCSLEPMRA
VPHRVVVLLGLDDGAFPRGHGRDGDDLLAREPLVGERDRRAEDRRLFLDAVTSATDHLLV
VHSGADERTGATRPAAVPVGELLDALDDAVVFPDGLPAREHVVVHHPLQTVDERNFVGGA
LGRPGPFSFDALDLAAARAGRAVRAGRRPFLVEPLPPVEPLDDVGDVADVLTHPVRAFVR
RRLRAMPPGDAPQLDDRLPLQLDGLERWEIGDRLLDAALTGADLTTAVAAERRRGHVPPG
SLGTATLDDVARSVVPVLDAVRTLRVQPGRTLDVALTLPDGRPVTGTVGPCHGDTLVRAV
YSRLAAKHRLRAWVLLLAAAVAEPGALARAVTVGRGPGGGARIAELQAPAPELAASLLGQ
LAAVADQALCEPLPLPLAASCAYGSARWDGQPVHDALAAARKELGTLDEARRGAGGFDVV
EPSHALVWGEGFSLDTIAGTATPVDLARWPEDVTRFGALARTVWDALLDHETVAMVVA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
gtgacggccgtgagggacacgaccgacggcaccgacgcgggggcgatgcacgtccacgtc
gcggagcgggccgacgtcctcgtggaggagctggcacgcgtgctcgccgaggcccccgcg
gaccccttcacccccgacgtggtgctggtgccgacgcgcggcgtcgaacgctgggtcgcg
cagcggctctcgcaccggctcgggcaggccggtggcggcgacggcgtctgtgcgaacgtc
cggttctcctctcccgcgcgggcggtcgccgacgtcctcgccgcggtggtaggtgcagcg
cccgaggacgacccgtgggcgccggaacagctcgcctggcacgtcctcggcgttctcgac
gaccacgccgacgacccgctcctggcggcgcccgtgcaccacctgggcgcgcgcgacgac
gcgatgcggcaggggcggaggttcgggctcgcgcagcatgtcgcgcacctgctcgccgcg
tacgacgtgcagcggccgacggtcgtgcgcgcgtgggccgacggacgggacgaggacggc
gcaggcgcccctctccccgccgacctcgcgtggcaggcgcacctgtggcggctggtgcgg
gcacgggcggccgtaccgtcgccggcccaacggatcgacgaggccgtcgcgatgctcgcc
tccgccccggacacggtctcgctccccgcccggctctcggtcctgggcgcgacgcgactc
ccggacgcgcacgtgcgggtgctcgacgccctggctcggcaccgcgacgtccacctctgg
ctgccccacccgtcgctgcggctgtgggagcgggtcggagcagcgtcgccgccagcgggt
cggcgacgtgacctgccaccggtcgccgagcacccgctcctggcctcgatggcgggcgac
gccgtcgagctgcagatccggctgcgagccgtcgacgcgcaggtcatcctgcacgccgca
gccgatccgccggcgacggctctcggccacctccagcgccgcctccgggcagacgccgca
ccgaccgaggcggcggcgcagcgaccggtcgtcgacgtgggcgaccggtccgtgcaggtg
cacgcgtgccacggccggtcacggcaggtcgaggtgatgcgcgaggccgtgctgggtctg
ctcgcggacgacccgtcgctcgagccgcgggacgtggtcgtgatgtgcccggacgtcgag
gcgttcgccccgctggtctcggcggcgttcggcgcgggcagcaccggtgggacgcagtgg
gagcacccgggacggtcgctgcgcgtgcgggtcgctgaccgggcgccggcgcgcgccaac
ccgctgctcgcgttcatctcgacgctcctggatctggccgcgtcgcgcgtgacggcctcg
gccgtggtcgacctcgcagggctcgcgccggtgcggcaccggttccgcctcgacgacgcc
gacctcgaccgcatccgtgcgtgggcgctggagtccggggtccgctggggtgaggacgtc
gcacgacgggaccgcttccggctgggctccgtcccgcagggcacgtggtccggggcgctg
gaccggttgctgctgggcgtcgccatggcggaggaggaccagcggtacgtcggcgccgtg
ctgccggtcgacgacgtgggcagcaccgacgtcgacctcgtcggcaggctcgccgagctg
ctggaccggctcaccgccgtcctgcacgcgctcgacgggacccgtccggcgacggcgtgg
ctggacaccctgaccgccgcgctcgacctgctgaccgatgtcgcgccggccgaccgctgg
cagcaggtcgaggcgctccgggtcctcggggaggtccggacctcggccgcgcagcacgac
agggacctacgcctgcccgacgtcgtcgcggtcctcgagcctcacctgcgcggccggcct
acgcgcgcgggcttccgcacgggagcgctgaccgtgtgctcgctcgagccgatgcgtgcg
gtgccgcaccgcgtcgtcgtcctgctcggcctcgacgacggcgccttcccgcgtggtcat
ggtcgcgacggggacgacctgctcgctcgggagccgctcgtcggcgaacgggaccgccgt
gccgaggaccgacgtctcttcctggacgccgtcacgagcgccaccgaccacctgctggtg
gtgcactcgggcgccgacgagcgcacgggcgcgacgaggccggccgcggtgccggtcggc
gagctgctcgacgcgctggacgacgcggtcgtctttcccgacgggctgccggcgcgtgag
cacgtcgtcgtccatcacccgctgcagaccgtggacgagcgcaacttcgtcggcggcgcg
ctcggccggccggggccgttcagcttcgacgcgctcgacctcgccgccgcacgcgcgggc
cgggccgtgcgggcgggtcgccgaccgttcctggtggagccgttgccgcccgtcgagccg
ctggacgacgtcggcgacgtcgccgacgtgctcacgcacccggtccgcgcgttcgtccga
cgtcggctacgcgcgatgccccccggggatgcgccgcagctcgacgaccgcctgccgctg
cagctcgacgggctcgagcggtgggagatcggcgaccgtctcctcgacgcggccctgacc
ggcgcggacctcacgacggcggtggcggccgagcggcgccgcggccacgtcccgcccgga
tcgctcgggacggcgacgctggacgacgtcgcccggtcggtggtgcccgtgctcgacgcg
gtgcgcacgctgcgcgtccagccgggccggacgctcgacgtcgcgctgacgctgcccgac
ggccgccccgtgacgggaaccgtcggcccgtgtcacggggacacgctggtgcgcgcggtg
tactcccggctcgcggccaagcaccggctgcgggcgtgggtgctgctcctcgccgcggcc
gtcgccgaaccgggcgcgctcgcccgtgcggtcacggtcggtcgcggaccgggcggtggc
gcgcggatcgcggagctgcaggcaccggcacccgagctcgctgcgtcgctactcggccag
ctcgccgccgtcgcggaccaggccctgtgcgagccgctcccgctgccgctcgccgcgagc
tgcgcgtacggctcggcacggtgggacggacaaccggtgcacgacgcgctggccgccgcg
cgcaaggagctcgggacgctcgacgaggcgcgccgcggcgccggcgggttcgacgtcgtc
gagccctcgcacgcgctcgtctggggcgaggggttctcgctggacacgattgccggaacg
gcgaccccggtcgacctcgcccgctggccggaggacgtgacgcgcttcggtgccctggcc
cgcacggtctgggacgcgctgctcgaccacgagacggtcgcgatggtggtcgcgtga
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