Cellulomonas fimi: Celf_2540
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Entry
Celf_2540 CDS
T01490
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cfi
Cellulomonas fimi
Pathway
cfi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Celf_2540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfi03400
]
Celf_2540
Enzymes [BR:
cfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Celf_2540
DNA repair and recombination proteins [BR:
cfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Celf_2540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
UvrD-helicase
AAA_16
AAA_28
PhoH
SLFN-g3_helicase
TraI_hel_assoc_N
NPHP3_N
Phageshock_PspD
nSTAND3
NTPase_1
SH3_13
SRP54
MeaB
AAA_5
AAA
NACHT
TrwB_AAD_bind
DO-GTPase1
CbiA
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AEE46665
UniProt:
F4H559
LinkDB
All DBs
Position
2829592..2831526
Genome browser
AA seq
644 aa
AA seq
DB search
MTVDAPAGDGRGTDPRVPWRVDGLLAPFVRAGALASADVHVARRLGAIAHETDERVHLAV
ALAVAAVRAGSVCVELADAPGAVAALLDGADPPRAADLPWPALDGPDGWVAAVRRSPLVG
DGLDGADDRPVRWVDGRVYLDRYWRDELSVRREVEARLARGAPAAPGAADDQADIDAAGG
DGPVDGSNCSDGAIDDVARRLFPAATDDRQREALRTASTSLLTVLTGGPGTGKTTTVARL
VAALQATAGPGLRVALAAPTGKAASRLQESVNAQVATLDEDDRARVGTLTATTLHRLLGP
RPGSTTRFRHDRDRRLPHDVVVVDESSMVSLPLMARLVEALRPDARLVLVGDPDQLASVE
AGAVLGDLVASLHGRAVVRLTQTHRFGDDLAALAAAVRAGDADATLALLRTGGAHVRLTA
TEVDAPAPDDLVGLRHDVVTAGRALVAAARAGDAAAALAALGQHRLLLAHREGPAGVARW
AAQAEAWVEAATDARDSREPWPLGLPLLVTENDPSSGLSNGDTGVVVRDLVGTGTRGPAA
HGPAPGDAVVVAFGDPDRPHLVRPHRLPAVQPVHAMTVHRGQGSQFTRVTVLLPPATSPL
LTRELLYTAVTRARESVHVIGSPDAVRAAVERPVRRASGLRHPL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtcgacgcacctgccggggacgggcgaggcaccgatccccgcgtgccgtggcgt
gtcgacgggctgctcgccccgttcgtccgagcgggggcgctcgcgtcggcggacgtccat
gtggcgcgtcggctcggggcgatcgcgcacgagaccgacgagcgggtgcacctcgcggtc
gcgctcgcggtggcggccgtgcgggccgggtcggtctgcgtcgagctcgccgacgctccg
ggtgcggtcgccgcgctgctcgacggggccgatcccccgcgtgccgccgacctgccctgg
cccgcgctcgacggtcccgacggctgggtggccgccgtgcgccggagcccgctggtcggc
gacgggctcgacggtgccgacgaccggccggtccggtgggtggacggccgcgtctacctc
gaccggtactggcgcgacgagctgtcggtccgccgcgaggtcgaggcacgcctcgctcgc
ggggcaccggccgcacccggggccgcggacgaccaggccgacatcgacgcggcgggcggc
gacgggcccgtcgacggcagcaactgcagcgacggcgcgatcgacgacgtcgcacgcagg
ctgttccccgccgcgaccgacgaccggcagcgcgaggcgctgcggacggcgtcgacgtcg
ttgctgacggtcctgacgggcggccccggcacgggcaagaccacgacggtcgcgcggctc
gtcgccgcgctgcaggcgaccgccggaccgggcctgcgcgtcgcgctcgccgcgccgacc
ggaaaggccgcctcccggctccaggagtcggtcaacgcccaggtcgcgaccctcgacgag
gatgaccgggcgcgcgtcgggacgctcacggcgacgacgctgcaccggctgctggggcca
cgcccgggcagcacgacccgcttccggcacgaccgggaccgccgcctgccgcacgacgtc
gtcgtggtcgacgagtcctccatggtgtcgttgccgctcatggcccggctggtggaggcg
ctccggccggacgcccggctcgttctcgtcggtgaccccgaccagctcgccagcgtcgag
gcgggtgccgtgctgggcgacctcgtggcgtccctgcacgggcgcgcggtggtgcggctc
acccagacccaccggttcggcgacgaccttgccgcactcgcggcggcggtccgcgcgggc
gacgccgacgccacgctggccctcctgaggacgggcggtgcgcacgtccgtctcacggcc
acggaggtcgacgcgccggcgccggacgacctggtcggcctgcgccacgacgtcgtcacc
gccggtcgggcgctggtcgcggccgctcgtgccggcgacgcggccgccgcgctcgcggcg
ctcgggcagcaccggctgctgctcgcccaccgggagggcccggccggcgtggcccgctgg
gcggcccaggcggaggcgtgggtcgaggccgccacggacgcgcgcgactcccgggagccg
tggccgttggggctgcctctgctcgtcacggagaacgacccgtcgagcgggttgtccaac
ggcgacaccggggtcgtggtccgggacctggtcggcaccgggacccgtgggccggcggcg
cacggaccggcaccgggcgatgccgtcgtcgtggcgttcggcgatcccgatcgtccgcac
ctggtgcggccgcaccggctccccgccgtgcagccggtgcacgcgatgacggtgcaccgg
gggcagggcagccagttcacgcgcgtgaccgtcctgctgccgcccgcgacgtcgccgctg
ctgacccgcgagctgctctacaccgccgtgacgcgcgcccgcgagtccgtgcacgtgatc
ggctcgcccgacgccgtgcgggcagccgtcgagcgacccgtccgacgtgcgagcggccta
cggcacccgctgtga
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