Cellulomonas fimi: Celf_2815
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Entry
Celf_2815 CDS
T01490
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cfi
Cellulomonas fimi
Pathway
cfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Celf_2815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfi03021
]
Celf_2815
03019 Messenger RNA biogenesis [BR:
cfi03019
]
Celf_2815
Transcription machinery [BR:
cfi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Celf_2815
Messenger RNA biogenesis [BR:
cfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Celf_2815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
FANC_SAP
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEE46939
UniProt:
F4H7X8
LinkDB
All DBs
Position
complement(3140541..3142715)
Genome browser
AA seq
724 aa
AA seq
DB search
MGPATDEGEGSFVTDTIDPAVTTTGGSARGGSITALRLPELQALASELGVKGTSKMRKGD
LVEAITAARGAARTRALDEPRRAEAVAVADAAPVRERRRRAPQPAQEGAAPAAAEPSPAQ
PRVEAEPRAERAARTDREPRADREPRAEREPRADSEPRTDSEPRAGRESRTDREPRTERE
PRAEREPRADREPRADREPRRDEEQRPRQDALAGLEAALDARLAPAEARDDRAARGDAQA
ERRSRRAGRGQGAPEEPRRGDEPVQRPQPEQAGRGQGAPAPQAEGVLDDDERGGRRRRSR
DRYRDRDRKRGRGRSGQPEVAGLDEIEVTEDDVLLPVAGILDVLDSYAFVRTSGYLPGAN
DVYVSLSQVKKAGLRRGDAITGAVRQPREGEQAPQQGNRPSKFNALVRLDTVNGLSPEEA
RQRPEFTKLTPLYPQERLRLETEPTRLTPRVIDIVAPIGKGQRGLIVAPPKAGKTIIMQQ
IANAISANNPEVHLMVVLVDERPEEVTDMERTVRGEVIASTFDRPASDHTIVAELAIERA
KRLVELGQDVVVLLDSLTRLSRAYNLAAPASGRILSGGVDASALYPPKKFFGAARNIENG
GSLTILASALVETGSKMDEVIFEEFKGTGNMELRLSRSLADKRIFPAVDVNASGTRREEI
LMAQDELKIVYKLRRVMGALDQQQAIELLVGKLRETKSNVEFLLQVQKTTPGGTLGDAEV
GRTV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtggggccggccaccgacgagggggaagggtccttcgtgacagacaccatcgatcccgcc
gtgacgacgaccggcgggtccgcccgcggcggctcgatcaccgcgctgcgcctgcccgag
ctgcaggcgcttgcctccgagctgggggtcaagggcacctcgaagatgcgcaagggcgac
ctggtcgaggccatcacggccgcccggggcgccgcccgcacgcgtgcgctcgacgagccg
cgccgcgccgaggccgtcgccgtcgcggacgcggcgcccgtgcgcgagcgccgccgccgt
gcgccgcagcccgcgcaggagggcgccgcgccggccgcggccgagccttcgccggcccag
ccgcgcgtcgaggccgagccccgtgccgagcgggcggcgcgcaccgaccgtgagccgcgc
gccgaccgtgagccgcgcgccgagcgtgagccgcgcgccgacagtgagccgcgcaccgac
agcgagccgcgcgccgggcgtgagtcccgcaccgaccgtgagccccgcacggagcgtgag
ccgcgcgccgaacgtgagccgcgtgccgaccgtgagccgcgtgccgaccgtgagccgcgc
cgcgacgaggagcagcgtccccgccaggacgcgctcgccggcctggaggccgctctcgac
gcgcgcctcgcacccgccgaggcgcgcgacgaccgcgcggctcgcggcgacgcgcaggcc
gaacggcgctcgcgccgcgccggccgcgggcagggcgctcccgaggagccccgtcgcggc
gacgagcccgtgcagcgtccgcagcccgagcaggcgggccgaggccagggcgcaccggcg
ccgcaggccgagggcgtcctcgacgacgacgagcgcggcggccgccgccgtcgctcccgc
gaccgttaccgcgaccgggaccgcaagcgcggccgcggtcgcagcggtcagcccgaggtc
gcgggcctcgacgagatcgaggtcaccgaggacgacgtcctgctgcccgtcgcgggcatc
ctcgacgtgctcgactcctacgcgttcgtccgcacgtcgggctacctgccgggtgcgaac
gacgtgtacgtctcgctcagccaggtgaagaaggccgggctgcgccgcggcgacgcgatc
acgggcgcggtccgccagccccgtgagggcgagcaggcgccgcagcagggcaaccggccg
agcaagttcaacgcgctcgtgcggctcgacacggtcaacggcctgtcgcccgaggaggcg
cggcagcgtcccgagttcaccaagctcacgcccctgtacccgcaggagcggctgcgcctg
gagaccgagccgacgcgcctgacgccgcgcgtcatcgacatcgtcgcgcccatcggcaag
ggtcagcgcggcctcatcgtcgcgccgcccaaggcgggcaagacgatcatcatgcagcag
atcgcgaacgcgatctccgcgaacaaccccgaggtccacctcatggtcgtgctcgtcgac
gagcgccccgaggaggtcacggacatggagcggacggtccgcggcgaggtcatcgcctcg
acgttcgaccgtcccgcctcggaccacacgatcgtcgcggagctcgcgatcgagcgggcc
aagcgcctggtcgagctgggccaggacgtcgtcgtgctgctggactcgctgacccgcctg
tcgcgcgcctacaacctggccgcgcccgcgtcgggccgcatcctgtccggcggtgtcgac
gcctcggcgctgtacccgccgaagaagttcttcggtgcggcccgcaacatcgagaacggc
gggtcgctcaccatcctggcgtcggcgctcgtcgagaccggctccaagatggacgaggtc
atcttcgaggagttcaagggcaccgggaacatggagctgcggctctcgcggtccctggcg
gacaagcgcatcttcccggcggtcgacgtcaacgcgtcgggcacgcgccgcgaggagatc
ctcatggcgcaggacgagctcaagatcgtctacaagctgcgccgggtcatgggtgcgctc
gaccagcagcaggcgatcgagctgctcgtcggcaagctccgcgagacgaagtccaacgtc
gagttcctgctccaggtgcagaagacgaccccgggcggcacgctcggcgacgccgaggtc
ggccgcacggtctga
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