Cellulomonas fimi: Celf_3709
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Entry
Celf_3709 CDS
T01490
Name
(GenBank) putative exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cfi
Cellulomonas fimi
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfi03400
]
Celf_3709
DNA repair and recombination proteins [BR:
cfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Celf_3709
Archaeal homologous recombinant proteins
Celf_3709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
AAA_21
HmpF
AAA
Motif
Other DBs
NCBI-ProteinID:
AEE47815
UniProt:
F4H4M0
LinkDB
All DBs
Position
complement(4145212..4148346)
Genome browser
AA seq
1044 aa
AA seq
DB search
MQLRSLTVQALGPFAGRHTVDFAALGASGLFLLEGPTGSGKSTLIDAVVFALYGKVASAD
ASDDRLRSAYAADDVPTVVDLTFEVASGVYRVRRSPGYDRPKKRGTGTVKQQPSITLWRL
GSDDPAAADPDALPAGDVLSTRLDEAGAEIQRVVGLDRTQFVQTVVLPQGEFARFLRANP
EDRRGLLQKIFGTEVYDRIGRRLVELRRESAAAVEAARSALGTAAAHLVGAARLDADDAS
TLRAALDAAAAEDAADGVDAVRAVLDGLGRDVRAAADQARVHAENAEQARAAARSALDEA
TRTADLVRRRDRLRSDRAALAEAAPVHEEAQARLARARAAKAVRPLLRRADEATVTLEAA
AKTLDAALDTAPVDLADLARTAFGDAAGTALDLVRDDAPARPFRASEARRGLDAQREADV
ARAGAVDRLVAVEAGLEAQRHEVRNARTTVEDLHAEIAVHDTWLAGRPDARSQLEDALHG
ARELAGSVEGRAARVAALEELGANLRALDAARAAHDAACEARAGAAVVARDAVAHEAALR
TARIAGLAGELAAALQDGDPCSVCGAVEHPAKAPLAPDHVSADDVRQAEDVRAAAEEALR
VADARVAECAERVAGLTRTCADALPDDVAEQLAEARAALDAARASAADVPRLDQELRAHD
EATRLRSRERAEASTALAGAEVRAETLAQALASAEAEVEAGHDGFPTVAARHAALRERIT
AAATLADALLDLEHAARQAQEHRTELAGALADHGFPDTDEARDAVLDPAALDELVAGVEA
YTAAVAAVTAGLADAALAALPEHVDVDLDAARAAESGARTAAEHAAGEARVALDRVAAVE
AAAADVLAAAECVVEHAAAHAPVARLAALAAGTGGDNAHALSLATYVLTRRFEDVVAAAN
DRLAGMSDGRYELVRSDRKEDVTSRRTGLSMRVVDHRTGQERDPRTLSGGETFYVSLCLA
LGLADVVSAEAGGIDLGTLFVDEGFGSLDPHTLEQVLTELGRLRAGGRVVGVVSHVDTLK
QAIADRIEVRPTPHGPSTLTVRAG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgcggtcgctcaccgtccaggcgctcggcccgttcgcgggccggcacaccgtc
gacttcgccgccctcggggcgtccgggctgttcctgctggagggaccgaccgggtccggc
aagtcgacgctcatcgacgcggtcgtcttcgcgctgtacgggaaggtcgcgtccgccgac
gcgtccgacgaccggctgcgctcggcgtacgccgccgacgacgtgccgaccgtcgtcgac
ctgaccttcgaggtcgcgtccggcgtctaccgcgtgcggcggagccccgggtacgaccgc
cccaagaagcgcggcacgggcaccgtgaagcagcagccctcgatcaccctgtggcggctc
ggctccgacgaccccgcggccgccgacccggacgcgctgcccgcaggcgacgtgctctcg
acccggctcgacgaggccggtgcggagatccagcgggtcgtcgggctcgaccgcacccag
ttcgtgcagacggtcgtgctgccgcagggcgagttcgcgcggttcctgcgcgccaacccc
gaggaccgccgcgggctgctgcagaagatcttcgggaccgaggtgtacgaccggatcggg
cgccggctggtcgagctgcgccgcgagtccgcagcggcggtcgaggcggcacgctcggcc
ctcgggacggccgcggcgcacctggtgggcgccgcccggctggacgccgacgacgcctcc
accctgcgtgccgcgctggacgcggccgccgcggaggacgccgccgacggcgtcgacgcg
gtgcgcgcggtcctcgacgggctgggccgtgacgtccgcgcggcggcggaccaggcgcgc
gtgcacgccgagaacgcggagcaggcccgggcagcggcgcggtccgcgctcgacgaggcg
acccggaccgccgacctcgtgcgccgccgcgatcggctgcgatccgaccgggccgcgctc
gccgaggcggcccccgtgcacgaggaggcgcaggcacgcctcgcgcgagcccgcgccgcg
aaggccgtccggcccctgctgcggcgcgcggacgaggcgacggtcacgctcgaggcggcc
gcgaagacgctcgacgccgcgctcgacacggccccggtcgacctggcggacctggcccgg
accgcgttcggagacgcggccgggacggcgctcgacctcgtccgtgacgacgcgccggca
cggccgttccgcgcgtcggaggcccgcaggggcctcgacgcgcagcgcgaggccgacgtc
gcgcgcgccggggccgtcgaccggctcgtcgccgtcgaggccgggctcgaggcgcagcgc
cacgaggtccgcaacgcccgcacgaccgtcgaggacctgcacgccgagatcgccgtgcac
gacacctggctcgcgggccgccccgacgcgcggtcgcagctcgaggacgcgctgcacggc
gcgcgcgagctcgccgggagcgtcgagggccgtgcggcccgggtcgccgcgctggaggag
ctgggcgcgaacctgcgggcgctcgacgccgcccgggcggcgcacgacgcggcgtgcgag
gcgcgcgccggggcggcggtcgtggcacgcgacgccgtcgcgcacgaggcggcactgcgc
accgcccggatcgccgggctcgcgggcgagctggctgccgcgctgcaggacggcgacccg
tgctccgtgtgcggcgcggtcgagcaccccgcgaaggcgccgctcgcaccggaccacgtc
tccgccgacgacgtgcgacaggccgaggacgtccgggccgccgccgaggaggcgctccgg
gttgcggacgcccgggtcgcggagtgcgcggagcgggtcgcggggctgacccgcacgtgc
gccgacgcgctccccgacgacgtcgccgagcagctcgccgaggcccgggctgcgctcgac
gccgcccgcgcgtcggccgcagacgtcccccggctggaccaggagctgcgcgcgcacgac
gaggccacccgtctgcgctcacgggagcgcgcggaggcgtccaccgcgctcgccggagcc
gaggtccgcgccgagaccctcgcgcaggcgctcgcgtccgccgaggccgaggtcgaggcc
gggcacgacgggttcccgacggtcgcagcccggcacgcagcgctgcgcgaacggatcacg
gctgcggcgacgctcgcggacgcgctgctcgacctggagcacgccgcccggcaggcgcag
gagcaccggacggagctcgccggcgcgctcgcggatcacggcttccccgacaccgacgag
gcacgcgacgccgtgctcgaccccgccgcgctcgacgagctcgtcgccggcgtcgaggcg
tacaccgccgcggtcgccgccgtcaccgccggactggccgacgcggcgctcgcggctctg
cccgagcacgtcgacgtcgacctcgacgcggcacgggccgccgagtcgggtgcccgcacg
gccgccgagcacgcggcgggcgaggcgcgggtcgccctcgaccgggtcgctgccgtcgag
gccgccgcggccgacgtgctcgccgccgccgagtgcgtcgtcgagcacgccgccgcgcac
gcccccgtcgcccggctcgccgcgctcgccgccgggaccgggggcgacaacgcgcacgcc
ctctcgctcgcgacctacgtcctgacgcgacggttcgaggacgtcgtggcggccgcgaac
gaccggctcgccgggatgtccgacggccggtacgagctcgtgcgcagcgaccgcaaggag
gacgtcacgagccggcgtacggggctgtcgatgcgcgtcgtcgaccatcggaccggccag
gagcgggacccgcggaccctgtccggcggggagacgttctacgtctcgctgtgcctcgcg
ctcggcctcgccgacgtcgtgtccgccgaggccggcggcatcgacctcgggacgctgttc
gtcgacgagggcttcggctcgctcgacccgcacacgctcgagcaggtgctcaccgagctg
ggccggctgcgcgccggggggcgcgtcgtgggcgtcgtctcccacgtcgacacgctcaag
caggcgatcgccgaccgcatcgaggtccgccccacgccgcacggaccgagcaccctcacg
gttcgcgccggctga
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