Chitinophaga filiformis: MYF79_01040
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Entry
MYF79_01040 CDS
T08225
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cfil
Chitinophaga filiformis
Pathway
cfil00550
Peptidoglycan biosynthesis
cfil01100
Metabolic pathways
cfil01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MYF79_01040 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MYF79_01040 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfil01011
]
MYF79_01040 (mrdA)
Enzymes [BR:
cfil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MYF79_01040 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cfil01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MYF79_01040 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UPK69873
LinkDB
All DBs
Position
complement(246853..248808)
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AA seq
651 aa
AA seq
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MSVYNQPRKRVIQFIMLGMVILIITRLFFLQVVEKKYSKLADANAVLRKVVYPSRGIIFD
RKGRSILSNDAMYDLVVTPINVKNIDTAYMCEILRIDKEEFRRRITSAIIKNGSRRVSVF
ASLLPPEMFGRLQESMYMFQPGFELVQRQIRSYPFNAAANILGYIGEVSPQMLQKPAYSA
YNQGDYLGMTGLERTYESVLMGQRGIQYLVKDNLNRPQGPYEKGEFDTAAIAGKNLRLAL
DVDLQVLGEHLMRNKIGSIVAIDPRTGGILTMVSAPTFDPNLLTGSYRARNFSRLFADTT
KPLFNRAIQAGYPPGSSMKPLTALIALDEGVITPSFGFPCFGAYTYCGRPIACTHHNAGH
AANLRLAIANSCNAYFVHLYRMEVDAAKWGGVKKGHQKWHDYISSFGLGHRLGVDIPGES
PGKAIDTAGMNKLYRGQWNSCSELYVGMGQGQVVATPMQMANAMCIIANKGYYYLPHFVD
KIDNDNTELLTKFREKHTVAHVSDSVYMPVIYGMEDVVERGTGVSAKIEGEIVCGKTGTA
ENNAIVNGKLTKLKNHSVFVAFAPRDNPKIAIAVVVENAGFGSTYAAPIASLIMEKYLHD
TISVKRKPQMKTLLEYNTLDPVVREKSKLDSLNGASAKMTSDEILKLYFRD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctataatcagcccaggaaaagagtaatacagttcatcatgcttggaatggta
atattgattattaccaggttgttctttttgcaggtagtggaaaagaaatattccaagctg
gcggatgccaacgcggtgctccgcaaagtggtatatcccagcagaggaattatttttgac
cgcaaaggcagaagtatcctcagtaatgatgcgatgtatgacctcgtggtaacaccgatc
aatgtgaagaacattgatacggcttacatgtgtgagatcctccggatcgataaggaagaa
ttcagaagacgcatcaccagcgctatcattaaaaatggtagccgtcgtgtatccgtattt
gcttccctgctgccgcccgaaatgttcggccgcctgcaggaaagtatgtatatgttccag
cccggcttcgagctggtacaacgccagatccgctcctaccccttcaatgctgccgccaac
atactcggttatatcggtgaagtatctccccagatgttgcagaaaccagcttacagcgca
tataaccagggcgattacctgggtatgaccgggctggaaagaacatatgaaagtgtgctg
atggggcaacgtggtatacaatatctcgtaaaagataacctgaaccgcccgcagggccct
tatgaaaaaggggaattcgatacggccgctattgccggtaagaacctccgtctggcactt
gatgttgacctgcaggtactgggtgaacacctgatgcgtaataagatcggcagtattgtg
gctatcgatccccgcacaggaggtatcctcactatggtgagtgcgcctaccttcgacccg
aacctgctgacgggctcctaccgtgcccgtaatttcagccggttatttgctgacactacc
aagccgctctttaaccgcgcaatacaggcaggatatccaccaggatcatccatgaaacca
cttaccgccctgatcgcgttagatgaaggggtgatcactcccagctttggttttccatgc
tttggcgcttatacctactgtggtcgtcctattgcctgtacgcaccacaatgcaggtcac
gctgccaacctcaggctggccattgccaactcctgtaacgcttacttcgtacacctgtac
cgcatggaagtggatgccgccaaatggggcggtgtgaaaaaaggacaccagaaatggcat
gactatatttcctctttcggtctcgggcacagactgggcgtggatattccgggtgaatcg
cccggtaaggcgattgataccgccggtatgaataaactgtaccgcggtcagtggaactcc
tgctccgagctgtatgtaggtatgggacagggacaggtcgtggctacccctatgcagatg
gcgaacgcgatgtgtatcattgccaataaaggttattactacctgccgcatttcgtggac
aagattgataatgataacaccgaactgctgacaaaattcagagagaaacatactgtggcg
cacgtatcagattctgtatatatgccggtgatatatggtatggaggatgtggtggaaaga
ggtacgggtgtgtctgccaaaatagaaggggagatcgtgtgtggtaaaacaggtacggct
gaaaataatgctatcgtgaacggtaagctgacaaaactgaagaaccactccgtatttgtg
gcctttgctccaagagataatccaaagatcgctattgcggtggtcgtggagaacgctggt
ttcggttccacttatgcggcgcctatcgccagcctgatcatggagaaatacctgcatgat
accatttctgtgaagcgtaagccacagatgaaaacattgctggaatacaacacgctggat
cctgttgtaagggaaaaatccaagcttgactccctgaatggagccagcgccaaaatgaca
tcagatgagatacttaaactttatttccgggattaa
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