Chitinophaga filiformis: MYF79_01845
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Entry
MYF79_01845 CDS
T08225
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfil02000
]
MYF79_01845
Transporters [BR:
cfil02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MYF79_01845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
UPK70033
LinkDB
All DBs
Position
complement(432005..433903)
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AA seq
632 aa
AA seq
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MKKYLLAIAAALIMISGCVKDDEFLSTDPKDLLTDEAVWKSPDLVLSVLADLYNRYPEQQ
TITNWAEFTNFDEAFPSESGQYWRTKQVDYPYDWWNLWDYGYIRDLNLFVQKCSAANELE
AGVRARFVAEARLLRAAIYFEEVKRMGGVPLILEPMEYNFSGDPAYLQHARAKESEIYDF
VISEMDSVKTVLPDDAGIKSRATKWLALAMQSRAALYAASIAKYGVNTPSVSLPGGEVGI
PADKAASYYQKALNAAGEIISSGRYSLYKKKAEDLEENFAALFYDKANNPEVIFAQDFKL
KSGKTQEWTLVNQPWSSAEEQQGGRVNPSLNLALLYEKLDNTYSPFATNNGNDYVYYNDP
KDIFAGRDARLGGTIILPGTKFKGVPLDIWAGVMYWKDGKYNIITGDNFGDLDSIPVAGA
PKSSQVVGTDGPVDGLQFSAQTGFFVRKFMDPTVGSGQIGTRSDVWWVRYRYAEVLLNAA
EAAFELGQPGLSSTYINQLRERAGFSTPLPEAAISFDRIVHERRVELAFEGHEMFDNKRW
RLAHKVWNGETISAADVVSNIGRADKVNTMIYGLWGYKIFNPGNPNHGKWVYRVVKPSNV
TAAHRFNFGNYYSRIGSDILSNNPKLVKNPNN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatttgctggcaatagcagctgcccttataatgatatccggatgtgtaaag
gatgatgaattcctcagcacagatccgaaagacctgcttactgacgaagcggtatggaaa
agcccggacctggtgttatctgtacttgctgatctttataaccgctatcctgaacagcaa
accattaccaactgggctgagttcaccaattttgatgaagcatttccttctgaatccggc
cagtattggagaacgaaacaggtagattatccgtacgactggtggaatctatgggattat
ggatacatccgcgacctgaatctttttgtacagaaatgcagtgctgcaaatgaactggaa
gctggtgtacgtgcccgttttgtagcagaagcacgtttgctgcgcgctgctatttacttt
gaagaagtaaagcgtatggggggagtaccgctgatactggagccgatggaatataatttc
agcggagatcctgcttatctgcaacatgcaagggcgaaagaatcagagatctacgatttt
gtgatcagtgagatggacagcgttaaaaccgtactgccggatgatgccggtattaaatcg
cgcgctaccaaatggctggcactggccatgcaatccagggcagcattgtatgccgcatcc
attgcaaagtatggggtgaatacgccctccgtatcattgcccggaggggaagtaggtatc
ccggccgataaagcagcgtcttattatcagaaagcgctgaatgcagccggggagatcatc
agcagtggcaggtattcgttatataaaaagaaagcagaagacctggaagagaacttcgcg
gcgcttttctacgataaagccaataacccggaagtgatctttgcgcaggactttaaactg
aaatccggcaagacacaggaatggacactcgttaaccagccctggtcatcggccgaagag
caacagggcggcagggtgaatccctcgcttaacctcgcgctgctgtatgagaaactggat
aatacttatagtccctttgcgaccaataacgggaacgactacgtgtactacaatgatcct
aaagatatttttgccggcagagatgcgcgtcttggaggtacgatcatcctgcctggcacc
aaatttaaaggtgtaccgctggatatctgggcaggtgtcatgtactggaaagacggaaag
tacaacattatcaccggcgataacttcggagacctggacagtattccggtagccggcgcc
cctaaaagctcccaggtggtaggcaccgacggaccggtagacggattgcagttcagcgcc
cagacaggtttctttgtgcgtaagttcatggaccctacggtaggctccggccagatcggt
acccgcagtgatgtatggtgggtacgttaccgttatgcagaagtattactgaacgctgct
gaagcagcttttgaactgggacagccaggcctttcatccacttatattaaccagctgaga
gagcgggctggtttttcaaccccattgccggaggccgccatttccttcgacaggattgtt
catgaaagacgcgtggaactggcctttgaagggcatgaaatgtttgacaacaagagatgg
cgcctggcgcataaagtatggaatggagagaccatatcggcggcagacgtggtgagcaac
attgggagagcagataaggtcaataccatgatttacgggctatggggatataagatattc
aacccgggaaatcctaaccatggaaaatgggtatacagggtggtgaaaccatccaatgtg
accgccgcccaccgtttcaatttcggaaactattattcccgcatcggttcagacattctc
agtaacaatcccaaactggtaaagaatcccaacaactaa
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