Chitinophaga filiformis: MYF79_03220
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Entry
MYF79_03220 CDS
T08225
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfil02000
]
MYF79_03220
Transporters [BR:
cfil02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MYF79_03220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
UPK70302
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Position
778189..779757
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AA seq
522 aa
AA seq
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MKNYIKKTALSILIGGSLFMTGCSNFLDESDPSNLSPDSYYTLPEHADAAVYAAYARARF
IGSGAGIFSANFQMLDAPTGTAATATAQNSDLNNLLGLVYDGDNLHVRQFWTGAYRVIAQ
ANLALDKIPGIPNMDEAIRARTLGEAAFMRAWSYFYIVRLWGDVPLITKPQTPTSPDFYP
KRTSTDSVYAQIVADLKMAEAAGLPWMDASGRVGLAAIKTELAKVYLTMAGYPLNKGAEY
YRLAADKAKEVLDYAAANSSELNLFNTYNDLHSVTNNNKVEHLFEVQYLADIEGNPMQSL
MLPNNSLTKNISAMGSGVGSSIPTPSFYDSYKKFEPKDKRTDEQQFFFTSYFVDGKGDPF
KLDRPYIFKHFDIAAHGKPGSPGTGRSNLNIPQIRFAETLLIYAEAQNQADGNPNVDAYT
ALNRVRGRAGLDPLSGLTKDAFEAAVWRERWHEFSYEGITWFDMVRLRKVYNEDNNGFDN
FVGHVNKNSGAALAEKHLLFPLPIQEMRNNPNLRPQNPGYGS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattatattaaaaaaaccgcgctcagcatattgatcggaggcagcctgtttatg
accggttgctccaacttcctggatgaaagcgatccatccaacctttcgccagacagctat
tataccttaccggaacatgctgatgcagcagtatatgcggcttatgcccgtgcccgtttc
attggaagtggcgccggtatcttttctgccaacttccagatgctggatgctccgacaggt
actgccgcaacagccactgcccagaactctgacctgaacaacctgctgggtcttgtatat
gacggagacaacctgcatgtcaggcaattctggacaggtgcctacagggtaatagcccag
gccaaccttgcacttgacaagatacccggcattcctaatatggatgaagcgataagagcc
cggacgctcggtgaagctgctttcatgcgtgcctggtcttacttctacattgtaaggctt
tggggtgatgttcctttgatcacaaaaccacaaacacctacttctcctgatttctatcct
aaacgtacaagcacagacagcgtatatgcgcagatcgttgctgacctgaaaatggctgaa
gcagcaggactgccatggatggatgcttccggtagggtaggcctcgcagctatcaaaact
gaactggcaaaagtatatctgaccatggccggttatccgctgaacaagggcgcagaatat
tacaggctggcagcagacaaagcaaaagaagtacttgattacgctgcggctaattcgtct
gagttgaacctgttcaacacttataacgatctgcatagtgtaacaaacaataacaaagtg
gaacacttgtttgaagtacaatatcttgctgatatagagggtaatccgatgcagtcgctg
atgctgccaaacaactccctgaccaaaaacatctctgctatgggtagcggcgtaggtagc
tcaatacctaccccttctttctatgactcatacaagaagttcgagcctaaagataaacgt
acagatgaacagcaattcttcttcacttcctatttcgtagacggtaaaggagatccattc
aaattagacaggccttatatattcaaacacttcgacatagctgctcatggtaaaccgggt
tcccctggtaccggcagaagtaacctgaatattcctcagatccgctttgccgaaacactg
ttgatctatgcagaagcgcagaaccaggcagatggtaatcctaatgtagacgcatacacc
gcattaaaccgtgtacgtggaagggcagggttggacccattatcaggtctgacaaaagat
gcctttgaagccgcagtatggcgtgagcgctggcatgagttctcttatgaaggtattacc
tggttcgatatggtacgcctgagaaaagtatacaacgaagacaataatggcttcgataac
tttgtagggcacgttaacaaaaactccggtgcggcactggcagaaaagcatctgctgttc
ccattgcccatccaggaaatgcgtaacaacccgaatctgagacctcagaatccaggctac
ggttcataa
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