Chitinophaga filiformis: MYF79_04365
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Entry
MYF79_04365 CDS
T08225
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfil03400
]
MYF79_04365 (radA)
DNA repair and recombination proteins [BR:
cfil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MYF79_04365 (radA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
AAA_24
AAA
AAA_16
DEAD
RUBY_RBDX
nSTAND3
DZR
SLFN-g3_helicase
AAA_14
DUF7125
HypA
DUF7129
NTPase_1
KdpD
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
UPK70528
LinkDB
All DBs
Position
complement(1042820..1044190)
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AA seq
456 aa
AA seq
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MKIKTAFFCQNCGYESAKWTGKCPSCGQWNTFVEEKVQKDIPLRNTSWQPEKENGRSDNI
VNLSEVSGIEEDRLLTPDAELNRVLGGGIVPGSLVLVGGEPGIGKSTLFLQNALQLKDIT
TLYISGEESAQQIKMRADRLQVKNDLFYLLTETSTQTIFQEIKKLRPQLVIVDSIQTLQS
PFIESAPGSVSQIRETTAEMQRFAKESHTPVFLIGHITKDGAIAGPKILEHMVDTVLQFE
GDQHYAYRILRTIKNRFGSTAELGIYEMTGAGLRQVTNPSEILISQREDQLSGVAIAATM
EGMRPMLVEVQALVTQSVYGTPQRTVTGFDLRRLQLLLAVLEKRGGFHFGVKDVFLNIAG
GIRVEDPSIDLAVLCALLSSYEDAAISSKICFAGEVGLSGEIRAVNRIEQRIAEAEKLGF
EKIFISRYNKKGTDFSKFNIEVVPVGRVDEVYRSLF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaactgcgttcttctgtcagaattgtggatacgaatcagctaaatggacc
ggtaaatgtccaagttgtgggcaatggaatacattcgttgaagaaaaagtacaaaaggat
atccctttacgtaataccagctggcaacctgaaaaagaaaacggcagatcagataacatc
gtgaacctttccgaagtgagcggcatagaagaagaccgcctgctcacgcccgatgcagaa
ctgaaccgtgtattgggcggcggtatagtacccggctccttagtacttgtaggaggcgaa
cccggtataggcaaaagcaccttgttcctgcagaacgcattgcaactcaaagacatcact
accctctacatcagtggtgaggaaagtgcacagcagataaaaatgagagcggacagatta
caggtaaaaaatgatctgttctatctgctcacagaaacatctacacaaaccatcttccag
gaaataaagaaactacgtccgcaactcgttatagttgactcgattcaaactttacaatcg
ccttttatcgaatcggctcccggtagtgtatcccagatcagggaaacgaccgccgaaatg
caacgttttgccaaggagagccatactcctgtgttcctcatcggccatatcaccaaagat
ggcgctattgcaggccctaagatactggagcatatggtagacaccgtgctgcagttcgaa
ggcgatcaacactatgcttaccgcatactccgcactatcaagaaccgtttcggatcaaca
gcggaactgggcatttatgaaatgaccggcgccggattaagacaggtcaccaacccgtcg
gagatcctgatatcacaaagggaagaccagctgagcggtgtggctattgccgctactatg
gaaggcatgcgccctatgctggtggaagtacaggcgctggtaacacagtctgtatatggc
actcctcaacgtaccgtcaccggtttcgatctgcgcaggctgcaactgctgctggccgta
ctggaaaaacgcggcggatttcatttcggtgtaaaagatgtcttcctgaacattgccggc
ggtattcgtgtagaagatccttctattgacctcgcagtattgtgcgcgctcttatcttcc
tacgaagacgccgccatcagcagcaagatatgttttgcaggagaggtaggtctcagtgga
gagatacgcgctgtgaaccgtatagaacaacgtattgcagaagcagaaaaactgggattc
gaaaagatcttcatcagccgctacaataagaagggcacagatttcagcaagttcaatatt
gaagtggtacctgtaggcagggtcgatgaagtatacagaagcctcttttaa
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