Chitinophaga filiformis: MYF79_06375
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Entry
MYF79_06375 CDS
T08225
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfil03400
]
MYF79_06375
DNA repair and recombination proteins [BR:
cfil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MYF79_06375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
AAA
ResIII
FtsK_SpoIIIE
AAA_16
AAA_30
Zot
AAA_19
T2SSE
CbiA
AAA_5
AAA_6
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UPK70925
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Position
complement(1522473..1524035)
Genome browser
AA seq
520 aa
AA seq
DB search
MATKEAFLEYIQNGYSFKGEHIKLGCAMLNGEVVAGADVSLPLKTLNRHGLIAGATGTGK
TKTLQVIAEALSDASVPVLLMDIKGDLSGIAAAGTGNPKIEERYQKIGGSWSPSAYPTEL
LSLSKEKGARLRATVSEFGPVLLSKILELNDTQEGLVSMIFKYCDDQKLPLLDLKDFKKV
LQFVSDEGKAEMEKDYGKISTTSAGTILRKVIGLEQQGADLFFGEASFEVDDLMRISDDG
RGIISIVRVADIQDRPKLFSTFMLSLLAELYATLPEEGDLEKPKLVMFIDEAHLIFQEAS
TALLQQIETIIKLIRSKGVGIFFCTQNPMDVPPSVLGQLGLKVQHALRAFTANDRKAIKT
TAENYPLSEYYKTDELLTQIGIGEALITCLNEKGQPTPLAATMLVAPRSRMDVLSDAEAD
AIVNTSKLVKKYNREIDNESAYEILSAKLEEAAEKTAKETEEKASSKGGGRQKEEKGILE
TVLTSSAARQAGRTAANIITRSLLGALGLGGKSSKKSSWF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaagaagcatttctggagtacatacaaaatggttattcctttaaaggtgaa
catataaaactgggatgtgccatgctcaatggcgaagtagtcgccggagccgatgtatcc
ctgcccctgaaaacactgaacaggcatggccttatagccggcgccaccggtaccggtaaa
accaagaccctgcaggtaattgcagaagcattgagcgatgccagcgtacctgtattgctg
atggacatcaaaggagaccttagcggtattgctgcagcaggaacaggcaatcccaagatc
gaagaacgttatcagaaaataggcggcagctggtcgccctccgcttatccaacagagcta
ctttccctgagtaaggaaaagggcgcgcgcctccgcgctactgtgagtgaattcggaccg
gtgctgctctccaaaatacttgaactgaacgatacgcaggaaggcctggtatctatgata
tttaaatactgcgatgaccagaaactgcccctgctggacctgaaagattttaagaaagtg
ttgcagtttgtaagtgatgaaggaaaggctgaaatggaaaaagattatggtaagatctct
accacatcggcgggtaccattctccgtaaggtgatcggcctggaacagcagggcgctgat
ctcttcttcggagaagcttcttttgaagtggatgaccttatgcgcatcagcgatgatggc
aggggtattatttccattgtaagggtggccgatatacaggatcgtccgaagttattctcc
acgttcatgttaagcctgctggcagaactgtatgctacattaccggaagagggcgatctt
gaaaaaccaaaactggtgatgttcatcgacgaagcccacctgatattccaggaagccagt
acagccttgctgcaacagattgagacgatcattaaactgatccgttccaagggcgtgggt
atcttcttctgtacacagaacccgatggatgtacctccatctgtactgggtcagctgggg
ttgaaagtgcagcatgcactacgcgcatttaccgccaatgacaggaaagccatcaaaaca
acggcggagaactatcccctgtctgaatattataaaacagatgagctgctcacacagatc
ggtatcggcgaagcgctcatcacctgtctgaatgaaaaaggtcagcctacaccactggcg
gccaccatgctggtagcgccacgctcccgtatggacgtactgtcagatgcggaggcagat
gctattgtcaatacctctaagctggtaaagaaatataaccgtgaaatagacaacgaaagt
gcgtatgagatactaagtgccaaactggaggaagcggccgaaaaaacggctaaagaaacg
gaagaaaaggcatcttccaaaggtggtggcagacagaaagaagaaaagggcatcctggaa
accgtacttaccagttctgctgcacggcaggcaggccgtactgcggcaaatatcataacc
cgcagcctgttgggcgcgctgggcctgggcggtaaaagcagtaagaaaagcagttggttc
taa
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