Chitinophaga filiformis: MYF79_06675
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Entry
MYF79_06675 CDS
T08225
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MYF79_06675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_06675
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_06675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_28
UPF0122
KORA
Motif
Other DBs
NCBI-ProteinID:
UPK70983
UniProt:
A0ABY4I4I4
LinkDB
All DBs
Position
1600027..1600896
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AA seq
289 aa
AA seq
DB search
MRQLKITKSITNRESQSLEKYLQEIGKVDLITPEEEVNLAIRIKQGDQRALEKLTKANLR
FVVSVAKQYQNQGLSLSDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKVGLSNKISKAYSQLEQEFEREPSPDELATILEINTEEVEATLGVAARHV
SMDAPFIDGEDNSLLDVLANPNAVNADEELDHHDSLRREIERSLSTLTDRQKDVIILYFG
IAVEHPMSLEDIGEKFGLTRERVRQIKDKAITKLRTTSRSKLLRNYLGS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaactcaaaatcacgaaatccatcacgaatagggaatcccagtccctggaaaaa
tatttgcaggaaattgggaaggtggatttaattactccggaggaagaagtgaacctggct
atccgcattaagcagggggatcagagagcgctggaaaagcttaccaaagctaacctccgt
tttgttgtgtctgttgcaaagcagtatcagaaccagggcttatctctcagtgacctgatc
aacgagggaaatctgggcctgatcaaagcagcacagcgttttgacgagacccgcgggttt
aagttcatttcctatgctgtatggtggatccgtcaatctattctgcaggcattggcagag
cagagccgtatcgtacgtttgccactcaacaaagtgggtttgagcaataagatcagcaag
gcatattctcaactggaacaggaatttgaaagagagccgtctcctgacgaactggcaacc
atcctcgagatcaatacggaagaagtagaagccactttaggcgttgctgcccgtcacgta
tccatggatgcaccgttcatcgatggtgaagacaactcgctgctggatgtactcgctaat
ccgaatgcggtaaatgcagatgaagaactggatcaccacgattcactgcgtcgcgaaata
gaacgttctttgtccacgctgacagacaggcagaaagatgtgatcatcctttacttcggc
atagcggttgagcatcctatgtcactggaagatataggcgagaaatttggcctgacacgc
gaaagggtacgtcagatcaaagacaaagcgatcacaaaattgcgtactacttcccgcagc
aaactgctgagaaattacctgggaagttga
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