Chitinophaga filiformis: MYF79_08105
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Entry
MYF79_08105 CDS
T08225
Name
(GenBank) collagen-like protein
Organism
cfil
Chitinophaga filiformis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF5907
Motif
Other DBs
NCBI-ProteinID:
UPK71244
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All DBs
Position
complement(1954727..1958023)
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AA seq
1098 aa
AA seq
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MKKLYLLLIFLAATCYSTYAQNGLSGTNYQAVVRNPNGTLVANKEITVRFSILGGSAAGP
VQYEETHEATTSALGLFNLQIGKGNATTGTFAGVPWANANQYLKVEVNTGSGFVALGTSA
LMSVPYALYAANGNPGPAGPQGPAGPQGPAGPAGAAGPAGVPGPTGPVGPIGPAGPAGAQ
GNPGPGGPVGPVGPAGAIGPVGPAGPAGVPGPVGPIGPIGPIGPVGPAGAQGDPGVAGPA
GPVGPIGPVGPAGTPGAAGPAGPAGPVGPIGPIGPVGPAGPVGPAGPVGPAGPAGDINGI
AAGGDLSGNYPNPIVANGAITLAKLAAGVIPTSLPPNGPAGGDLGGTYPNPNVIRLQNIP
VSNAAPAAGQVLKYDGANWAPAPLGGGGFTLPYVTTENNGATLFSITNDGDGTSIEGANN
TTTSNISAVRGLVNSTSPGGFSSAVRGINNGTGGLGIGVYGSQNGSGWGVYGVTPNGLGV
YGNASANGTGVYANSNTGTGLTATSNNGIPASISIFNNSNNNNALSVSTVGNGVVVNVTT
TGNGAGVRSSTSGGFGVHGITSAQTSAGVVGDNNGGGEAVVGRTTSDIAGAVVGRNDGGG
YGVRGFVATNTSNTGIGVYGQVGIGGSTGRAGRFENFNQTNIDANILEVVSNSNGNIPDN
TLGNASSFFLDNTNSVGAAVRAEVNTIFGNFGAAGVFGVSSGTGGRAGLFYASNPSGNGA
ALISLTDGNGNAITANAGKDGNGVETNIDGAGNALYAWVPTFATGRAGRFEIFNENNNNE
VITVKTVGNGTAGSFKVDRTTGTSPAIKGEVNSMFANFGTAGIYGQSSGTGGYAGLFYSS
NPAGNGPAIVALTEGTGNGITANAGGTGDGVEASCDGSGNAISGFIPNFGTGKAGRFANF
NNANSQPVVHITTTGTGATQLINHQGPSGNIAVFQSSSVNVARINKAGRGFFNGGTQNSG
ADVAEAFDVTGNVQAYSAGDVLVIAEDADRTVELSSKPYSTLVAGVYATKPGVLLTEEDI
DSDLDGKVPMGVIGVIPTKVCGENGPIRRGDLLVTSGKAGHAMKADLDKVKPGQVIGKAL
ENFNGEGAGKIKVLVNVR
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattatatctcctactgatattcctggctgctacctgctatagtacctatgcc
cagaacgggctttcaggtacaaattaccaggcggtggtccgtaacccgaacggtacgctg
gttgccaataaggaaattaccgtgcgtttttccatcctgggcggttctgcagccgggcct
gttcaatatgaagaaacccatgaggcaactaccagcgcgctgggcttgttcaaccttcag
attggtaaagggaatgccactaccggcacttttgcgggggtgccctgggcgaatgccaat
caatatctgaaagtggaagtgaataccggcagcggctttgtagccttaggcacctcagct
ttaatgagcgttccttatgcgctatacgccgccaatggcaatcccggcccggcgggcccc
cagggtcctgctggccctcagggaccggccggccctgccggtgcagccggacctgccggc
gttcctggtcccactgggcctgttggacctatcggtcctgcgggacctgcaggcgcacag
ggtaatcccggtcctggcggtcccgtcggaccggttggtccggctggagctattggtccg
gttggacccgctggccctgcaggtgttcccggtccggttggtcccatcggccctatcggc
cccatcggtccggtcggtcctgctggtgcacaaggtgatcccggagttgccggtcccgct
ggtcctgtcggtcctataggacctgttgggcctgcgggtacaccgggcgctgccggacct
gcaggtccagctggacctgttggtcctattggccccattggtccggttggtcctgccggc
cctgttggacccgcgggccccgttggcccggctgggcctgctggcgatatcaacggcatt
gccgccggtggcgatctgagtggtaattatcctaacccgatagtcgccaatggtgctatc
accctggctaaactggccgctggtgtaatccccacctcactcccaccaaacggaccggcc
gggggagatcttggtggtacttatcctaatcctaacgtaatccgtttacagaatattcct
gtttccaatgctgcacccgctgccggccaggtactgaaatacgatggtgcgaactgggcg
cccgctccattgggcgggggtggcttcacactgccatacgttaccaccgaaaataatggg
gctaccctgttttccattaccaacgacggggacggcacttccattgaaggcgccaataat
accaccaccagcaatatcagcgccgtacgcggactggtaaacagcacctctcccggtgga
ttttcttctgctgtaagagggatcaacaatggtacaggaggtcttggtattggtgtatat
ggctcacagaacggctccggttggggcgtatacggcgtaacgccaaacggcctgggtgta
tatggcaatgcatctgctaatggcaccggcgtttatgccaatagcaataccggaacaggc
ttaactgccacatccaacaatggtattcccgccagcatttcgattttcaacaattcaaat
aacaataatgcattaagtgtctcaacagtaggtaatggcgttgtggtcaatgtaactaca
acaggcaatggcgccggtgtgcgtagcagcaccagcggtggtttcggtgtacacggcatt
accagcgcccagacctctgccggcgttgttggcgacaataatggcggaggcgaggctgtt
gtaggtcgtaccacctccgatattgcaggtgcagttgtaggacgtaatgacggcggaggt
tatggcgtaagaggttttgttgccaccaacacaagtaataccggcataggcgtatacgga
caggtaggcattggtggaagcaccggcagggccggcagatttgaaaacttcaatcagacc
aatatagacgcaaacatcctggaagtagtaagcaacagcaatggtaatattcctgacaat
acacttggcaacgccagttctttcttcctggataataccaacagcgtcggggcagccgta
agagcagaggtcaataccatcttcggcaattttggcgcagcgggtgttttcggcgtttca
tcgggcactggtggccgcgcagggctcttttacgcctccaatccctcaggtaatggcgca
gccctcatatcgctgactgatggtaatggcaatgccatcactgccaacgccggaaaagat
ggtaatggtgtggaaaccaacatcgatggtgcaggcaatgcactgtacgcctgggtacct
acattcgccactggcagagcaggcaggttcgagatctttaatgaaaataacaacaatgaa
gtgatcacggtaaaaaccgtgggtaacggtacagccggtagcttcaaagtggacagaacc
acgggaacatctcctgcaataaaaggcgaggtgaattcgatgtttgccaacttcggtacc
gcgggcatctatggccagtcttccggcacgggcggttatgcagggttgttctattcatct
aatcctgcgggtaatggtcccgcgatcgtggcgctgacggaaggtaccggaaatggcatc
acggctaatgccggcggtaccggagacggtgtagaagccagctgcgacggatctggtaac
gccatttccggctttatacccaatttcggaacgggtaaagcgggtcgctttgccaatttc
aataatgccaactcccagcccgtagtgcatattaccactacaggtacaggcgccacacag
ctgatcaaccaccagggaccttcaggcaacattgccgtattccagagcagcagtgtcaat
gtggcccgtatcaataaagcaggcaggggcttcttcaacggcggtacgcagaacagtggt
gcagacgtggcagaagcgttcgatgtgacaggcaatgtacaggcttatagtgccggcgac
gtgctggtgatagcggaggatgccgacaggaccgttgaactgtcttccaaaccatattcc
acactggtggcaggcgtatatgccaccaagccgggtgtattattaacggaagaagatatc
gacagtgaccttgacggcaaggtgcctatgggcgttataggtgtgatacctacaaaggta
tgtggtgagaacggccctatccgccggggcgatctgctggtaacctccggcaaagccgga
catgccatgaaagcagacctggataaggttaaaccgggtcaggtaatcggaaaggccctg
gaaaattttaatggggaaggcgccggtaagatcaaggtattggttaacgtcagataa
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