Chitinophaga filiformis: MYF79_10735
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Entry
MYF79_10735 CDS
T08225
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cfil
Chitinophaga filiformis
Pathway
cfil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MYF79_10735 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfil03400
]
MYF79_10735 (recB)
Enzymes [BR:
cfil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MYF79_10735 (recB)
DNA repair and recombination proteins [BR:
cfil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MYF79_10735 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
NAT10_TcmA_helicase
ResIII
AAA_11
DEAD
EF-hand_14
LytR_C
AAA_22
DUF2023
Motif
Other DBs
NCBI-ProteinID:
UPK71758
UniProt:
A0ABY4I7Y3
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All DBs
Position
2623129..2626593
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AA seq
1154 aa
AA seq
DB search
MTEHINYQDFDAGTVPLQDSNLIEASAGTGKTYSIAILVLRLVLENALSVKEILMVTFTK
AAVAELEERIRLFVRHAHKASQGLEIKDDNIRRLVEEAMERNGLEQVQQQLKDAVLFLDE
TAVLTIHSFCQKTLNEFAFETDQLFGAEMIQDTRTLIEEEVQKFWRKYVTTLHIRLLEKI
WEPGMMSGITTALNEHMGGKRYFAYEPGKRYEIKVKEQEAWLQQLDAADDRKDAAEKELE
SFVKDNMDRLRTLCEGNQYAKKALLPCIDDPLQFIGVIKEKRSSAGYIAKLFPDLLERLD
KVAALDEERKGIVQQVISRLYCFAIEEIAAGVKGYKKRNNLLSYDDMITNLHRSLVEKNN
PRLVEVLQEKYKAVFVDEFQDTDRMQYEIFEKAFGSGTILFYIGDPKQSIYAWRKADIFT
YFKARASVQHVYGMNHNFRSSEPFIAAMNTFFLPSPDFDTFYFSGEGNAINYIEVESPEK
NTKGLLFRGEAADVPITVFNASNSNELTESVAAQVALLLRSGEYTIGNEESRRPVKPSDI
GILVRTGRQGREVKAQLAKLGVPAVTVDDARVLQSEEATYLLYLLEAMLEPNRSSINRAL
LSPFTNLKLEDVLLLDDEITLAYFGNYKNRWQQDGIYTAMMDFITDFNVRNILLHAHTES
GERVISNLFQLTELVHQIQSRKNLSMTELVSWLKRGIDGMATEGDEYEQRVESDEEAVNI
VTIHKSKGLEYKIVMAPFLDFVENKHAEFFSFRDPVTGDYVGVEKKRMTEEQRSSYARQA
EQENRRLLYVAITRGVYKCFVFRNNSKYYSNSTLLTFLQALIAAAPSPDIIKFEQDLPLA
PEQDAGRNTGSLVNTGTDAPVRFVLKEQNWRKMSYTMLAAKADKSLKVRASQQEDPYETF
IFHTLKRGAKTGNLLHFLFENINFSEDSRWEKWLTETIRRFVPGQQEVYMPMLRQLLEHV
LHTDITVGGQTFPLSAVVWHKRIPEFEFDFPVSAFFPDMLNGLSDDRTSVVVRRFHEHGS
HELEGIMNGKMDLFFEHEGKYYILDWKSNYLGDSPEDYTPAALSIAMNENNYHLQYLIYT
LAAKKYLESRLHAFNYEKQFGGVIYCFVRGIRKGQSTGIFTSKPPLAKILQLENSLSPNI
NKKQPPQQKLFDIY
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacatatcaactaccaggattttgacgcaggcaccgtgcccttacaggatagc
aacctgatagaggccagcgccggtacaggaaaaacatattccatcgccattctcgtattg
agactggtgcttgaaaatgcattgtctgtaaaagagatcctgatggtgacctttacaaaa
gctgccgtggcagagctggaagaacgtatccgcctgtttgtgcggcatgcccacaaggca
agccaggggctggagataaaggatgataacatccggcggctggtagaagaagcgatggag
cgtaatggcctggaacaggtacagcaacagctgaaagatgcagtattgttcctcgatgaa
acagccgtgctgaccatacacagcttctgtcagaaaacattgaatgaatttgccttcgaa
accgatcagctgtttggggctgaaatgatacaggatacccggacactgatagaggaggaa
gtacagaaattctggcgtaaatatgtgaccaccctgcatatccgcctgctggaaaagatc
tgggaaccgggtatgatgtctggcattaccaccgctctcaatgagcatatgggaggtaag
cgttacttcgcttacgaaccgggtaaacgctatgaaattaaagtaaaagagcaggaagca
tggctgcagcaactggatgctgctgacgataggaaagatgccgctgagaaagaactggag
agctttgtgaaggataatatggataggctgagaacattgtgtgaaggaaaccagtatgcg
aagaaggcattgttgccctgtatagacgatcctctgcagttcattggggttataaaagag
aaacgcagttccgcaggttacattgccaaattatttccggatctgctggaacgcctcgat
aaagtggcagccctggacgaagaacgcaaaggtattgtgcaacaggtgatcagccgtttg
tactgctttgctatagaagaaattgcagcaggggtgaagggctataagaagcgcaataac
ctgctgagttatgatgatatgatcactaacctgcacaggtcactggtggaaaagaataat
ccccgactggtagaagtgctgcaggaaaaatacaaagctgtatttgtggatgagttccag
gatactgacaggatgcagtacgaaatattcgagaaagcattcggcagcggaacgatcctg
ttttatataggcgatcccaagcagagtatctatgcatggcgtaaagcagacatcttcact
tatttcaaggccagggccagcgtacagcatgtgtacggtatgaaccataacttccgttcg
tctgagccttttatagcggccatgaataccttcttcctgccctcgcccgatttcgatacc
ttctatttcagcggagaaggaaatgcgatcaactacatagaggtagaaagccccgaaaag
aatacaaaggggctattattcagaggcgaagcggcagatgtacccattactgtttttaat
gcatccaatagcaatgagctgacggagagcgtagctgcgcaggtggctttgttgttgaga
agcggggaatataccatcgggaatgaagaaagcaggcgccctgttaaaccatccgatatt
ggcatcctggtgcgtaccggccggcagggaagggaagtgaaagcccagctggcaaaactg
ggagtgccggctgtaactgtagatgacgccagggtgttgcaatcagaagaggctacctac
ctcttgtacctgctggaggctatgctggaacctaacaggtcttccattaaccgtgcatta
ttgtccccttttacaaatctgaaactggaagatgtactcctgctggatgatgaaatcacg
cttgcctatttcggcaactataagaaccgctggcaacaggatggtatctatactgccatg
atggattttattacagacttcaatgttcggaatatattactgcatgcgcatacggaaagt
ggcgaacgcgttatttccaacctgtttcagctaacggaactggtacaccagatccagagc
cgtaagaatttgtccatgactgaactggtatcgtggttgaagcgcgggattgacggtatg
gccacagaaggagatgaatatgagcagcgggtggaaagtgatgaggaagcggtgaacatt
gtgaccatccataagagcaagggactggaatataagatcgtcatggcgcccttccttgat
tttgtggagaacaagcacgcggagttctttagcttccgcgatcctgttacgggcgattat
gtgggtgtggaaaagaaacgcatgacggaagaacagcgcagctcgtatgcccgccaggca
gaacaggagaacaggcgtttgttatatgttgccattacccgaggcgtatataaatgtttt
gttttccgtaacaacagcaagtattacagcaattccaccttattgaccttcctgcaggca
ctgatagcagcagcgccatctccggacattattaagtttgaacaggacctcccgctggcg
ccggaacaggatgccggcaggaatacggggagcctggtgaataccggtacagatgctcct
gtcaggtttgtgctgaaagaacagaactggcggaagatgagctataccatgctggccgca
aaggccgataagagcctgaaagtacgcgcctcgcaacaggaagatccttacgagacattc
atctttcacacactgaagagaggtgcaaagacaggtaacctgctgcacttcctgtttgag
aacatcaacttttcagaagatagccgctgggagaaatggctgacagaaaccatccgccgt
tttgtaccggggcaacaggaagtatacatgccgatgctgcgccagctattggaacatgta
ttacatactgacattacagtaggggggcagaccttccctttatctgccgttgtatggcat
aaacgtatcccggaattcgaatttgacttccccgtgtctgctttctttcctgatatgctg
aatggcctttctgacgacaggaccagcgttgtggtacgccgcttccacgagcatggcagt
catgaactggaagggatcatgaacggcaaaatggacctcttctttgagcatgaagggaaa
tattatatacttgactggaagtccaactacctgggcgattcgccggaagattacacaccg
gcggcattgtccatcgccatgaacgagaacaactatcatctgcaatacctcatctacaca
ttggctgccaagaagtacctggaaagccgcctgcatgcatttaactatgaaaagcagttt
ggtggcgtgatctattgtttcgtgagagggatcaggaaagggcagtctaccggcattttt
accagtaaaccgcccctggcgaaaatattacagctggaaaacagcctgtcgcccaatatc
aacaaaaaacagccaccacagcaaaagctgtttgatatctattaa
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