Chitinophaga filiformis: MYF79_10820
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Entry
MYF79_10820 CDS
T08225
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYF79_10820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_10820
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_10820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_23
HTH_40
HTH_10
HTH_28
HTH_20
TrmB
HTH_24
TnsD
DUF6456
HTH_5
HTH_17
HTH_7
Motif
Other DBs
NCBI-ProteinID:
UPK71774
UniProt:
A0ABY4I949
LinkDB
All DBs
Position
2653847..2654431
Genome browser
AA seq
194 aa
AA seq
DB search
MNTQDAELVVRLIEDDVSAFDALYWKYHQAVYRNIFKFVKEPIATEDILQEVYARLWEKR
KDINAGQSVAGWLFVISFNLSVDYVRKKLREHTFHKELYNLNIEGSSWEDNPAAYEEQYR
LLEDAISQLSPKKQKIVTLCKLEGKTYDEVAEELKISRNTVKEHLSIAMTRINEYVQKNK
EHKYVLLLLLFMRN
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacaagatgccgagttagtagtaagattaatagaagatgatgtaagcgccttt
gatgccctgtactggaaatatcaccaggcagtctatcgaaatattttcaagtttgttaag
gaacccattgcaacagaagatattttgcaggaggtctatgcccgcctgtgggaaaagaga
aaggacattaatgccggtcaatccgttgccggatggttgtttgtgatcagctttaatctc
tcggttgactatgtccggaagaaactacgcgaacatacttttcacaaggaattatataat
ctgaatattgagggtagcagctgggaggacaatccggctgcctacgaggaacaatatcgt
ttactggaagatgccatttcccagctttctcccaagaaacagaagattgtcactttatgt
aaattagaaggcaaaacatacgatgaagtagcagaagaactgaaaatttcaaggaatact
gttaaagaacatttatctatcgcgatgacgcggatcaatgaatatgtacagaagaataaa
gaacacaaatatgtactgttgctcctgctgttcatgagaaattag
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