KEGG   Chitinophaga filiformis: MYF79_11545
Entry
MYF79_11545       CDS       T08225                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cfil  Chitinophaga filiformis
Pathway
cfil03030  DNA replication
cfil03430  Mismatch repair
cfil03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cfil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MYF79_11545
   03430 Mismatch repair
    MYF79_11545
   03440 Homologous recombination
    MYF79_11545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfil03032]
    MYF79_11545
   03400 DNA repair and recombination proteins [BR:cfil03400]
    MYF79_11545
Enzymes [BR:cfil01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MYF79_11545
DNA replication proteins [BR:cfil03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MYF79_11545
DNA repair and recombination proteins [BR:cfil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MYF79_11545
SSDB
Motif
Pfam: RNase_T ExoX-like_C Rv2179c-like RNase_H_2 T4_Spackle QSregVF_b Hairy_orange
Other DBs
NCBI-ProteinID: UPK71918
UniProt: A0ABY4IA32
LinkDB
Position
complement(2873524..2874297)
AA seq 257 aa
MPSLQLKRPLAVIDLETTGTNVATDRIIEIAIIKVFPDKSTQSKVKRIHPGMPIPASSTA
IHGISDDDVKDCPNFKQCANELRQYLDNCDLAGYNSNRFDIPLLVEEFLRAGLEFDVKDR
KFIDVQKIFHLMEKRTLSAAYKFYCDKNLENAHSAEADALATYEILEAQLSRYEQLQAEV
GPLAEFTKEDDYVDFARRMVMQNGLEVFNFGKYKGRPVREVLKIEPQYYDWMMKADFPLN
TKQKLTEIYHSMMLKKI
NT seq 774 nt   +upstreamnt  +downstreamnt
atgccctctttgcaactgaaaaggcccctggccgtaattgatctggagacgaccggcacc
aatgtggctacggaccgtattattgaaattgctatcatcaaggtattccctgacaagagt
acccaatccaaggtgaaaagaattcaccccggcatgcctattcctgcatcctctaccgct
attcacggtatcagcgatgacgatgtgaaggattgtcccaatttcaaacaatgtgcgaat
gaactgcgccagtacctggacaactgcgacctggccggttataattccaaccgtttcgac
ataccattgctggtagaagaattcctgcgcgcaggcctagaatttgacgtgaaagaccgt
aaattcattgatgtgcagaagatcttccacctgatggaaaaacgcacgctcagcgctgct
tataagttctattgcgataagaacctggagaatgcgcacagcgctgaagcagacgccctg
gctacctacgaaatactggaagcacagctgtcgcgctacgagcagctgcaggctgaagtg
ggcccgctggcagaattcacgaaagaagacgactatgtagacttcgcaaggcgtatggtg
atgcagaatggccttgaagtattcaattttggtaaatataaaggaaggcctgtacgagaa
gtgcttaaaatagaacctcagtactatgattggatgatgaaagctgattttccgctgaat
accaagcagaaactcacagaaatatatcatagtatgatgttaaaaaagatttaa

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