Chitinophaga filiformis: MYF79_12430
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Entry
MYF79_12430 CDS
T08225
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYF79_12430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_12430
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_12430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
Motif
Other DBs
NCBI-ProteinID:
UPK72091
UniProt:
A0ABY4IBM9
LinkDB
All DBs
Position
complement(3095868..3096497)
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AA seq
209 aa
AA seq
DB search
MPYFWVLLDNKHYIDQELLQLVADGDRQAYQYLFETYWGQVFGACLHLTKSPEQAKDLTQ
DIFLKIWDHRQKLPAVRNFDSYIYTIARNLVRDQLRTAIFRESNREFLLHYFSAKGVSPQ
EILEEKQLSEKVKAAISSLPLKLQQVFTLSQLEGLSHKEIAGRLDISPLSSKTYMVRALL
LLRKILVKEADSLIIIGLLHLGHIFFYFF
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtgccttatttttgggtactattggacaataagcattatatagatcaggagttgttgcag
cttgtggcggatggcgacaggcaggcctatcagtacttatttgaaacatattggggccag
gtgttcggcgcctgcctccacctgacaaagtctcctgagcaggccaaagatctgacccag
gacatttttctgaagatctgggatcaccggcaaaaactgccggctgtcagaaattttgac
agttatatatatacaatcgcacgcaacctcgtacgtgaccagttgagaactgccatattc
cgggaatctaaccgggaattcctgctacattatttttccgccaaaggggtttccccacag
gaaatactggaggagaaacaattgagcgaaaaggtcaaagctgccatcagcagcctgcca
ctcaaactgcagcaggtattcacacttagccagctggaagggctgagccacaaggagatt
gccgggcgcctggacatttctcccctttcctccaaaacctatatggtgcgcgccctgctg
ttattgagaaaaatactcgtaaaggaagcggacagtttaattatcataggacttctacac
ctgggacatatttttttttattttttctga
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