KEGG   Chitinophaga filiformis: MYF79_12430
Entry
MYF79_12430       CDS       T08225                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil  Chitinophaga filiformis
Pathway
cfil02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cfil00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MYF79_12430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfil03021]
    MYF79_12430
Transcription machinery [BR:cfil03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MYF79_12430
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF GerE
Other DBs
NCBI-ProteinID: UPK72091
UniProt: A0ABY4IBM9
LinkDB
Position
complement(3095868..3096497)
AA seq 209 aa
MPYFWVLLDNKHYIDQELLQLVADGDRQAYQYLFETYWGQVFGACLHLTKSPEQAKDLTQ
DIFLKIWDHRQKLPAVRNFDSYIYTIARNLVRDQLRTAIFRESNREFLLHYFSAKGVSPQ
EILEEKQLSEKVKAAISSLPLKLQQVFTLSQLEGLSHKEIAGRLDISPLSSKTYMVRALL
LLRKILVKEADSLIIIGLLHLGHIFFYFF
NT seq 630 nt   +upstreamnt  +downstreamnt
gtgccttatttttgggtactattggacaataagcattatatagatcaggagttgttgcag
cttgtggcggatggcgacaggcaggcctatcagtacttatttgaaacatattggggccag
gtgttcggcgcctgcctccacctgacaaagtctcctgagcaggccaaagatctgacccag
gacatttttctgaagatctgggatcaccggcaaaaactgccggctgtcagaaattttgac
agttatatatatacaatcgcacgcaacctcgtacgtgaccagttgagaactgccatattc
cgggaatctaaccgggaattcctgctacattatttttccgccaaaggggtttccccacag
gaaatactggaggagaaacaattgagcgaaaaggtcaaagctgccatcagcagcctgcca
ctcaaactgcagcaggtattcacacttagccagctggaagggctgagccacaaggagatt
gccgggcgcctggacatttctcccctttcctccaaaacctatatggtgcgcgccctgctg
ttattgagaaaaatactcgtaaaggaagcggacagtttaattatcataggacttctacac
ctgggacatatttttttttattttttctga

DBGET integrated database retrieval system