Chitinophaga filiformis: MYF79_13960
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Entry
MYF79_13960 CDS
T08225
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfil03016
]
MYF79_13960 (miaB)
Enzymes [BR:
cfil01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
MYF79_13960 (miaB)
Transfer RNA biogenesis [BR:
cfil03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
MYF79_13960 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UPK72393
LinkDB
All DBs
Position
complement(3492841..3494262)
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AA seq
473 aa
AA seq
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MLEQVTKVHDESRQGEAYSSLDGETQTYTKKFYIESYGCQMNFNDSEIVASILREEGFGP
TRNVEEASLVLLNTCSIREKAETTVRKRLTEFKKIKQRNPELLVGVLGCMAERLKAKLLE
EEKLVDMVVGPDAYRTLPALIEEAETGQKAVNVLLSREETYGDINPVRLDSNGVTAFVSI
MRGCNNMCSFCVVPFTRGRERSRDVASILQEATDLFNRGYREVTLLGQNVDSYYWVDPQD
ASVVTTFANLLERVALISPLLRVRFSTSHPKDITDEVLFTMAKYENICKYIHLPMQSGST
RILQLMNRTYTREWYIKKVDRIREILPDCALSTDVITGFCTETEEDHQDTMSLMDYARYD
LAYMFYYSERPGTLAARRYQDDVPEEVKKRRLAEVVELHRGQSLRSMQQDVGKTFKVLIE
GTSKRSEDHLFGRTDHNKVVIFPKEDYRKGEYVWVKVDDCTAGTLLGTSTGRV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctggaacaggttacaaaagtgcatgacgaaagtcgccagggtgaagcttactcctcc
ctggacggagaaacacagacttataccaagaaattctatatagagagctacggttgccag
atgaactttaacgacagtgagatcgtcgcgtccatcctcagggaagaaggctttggcccc
acccgcaatgtggaagaggccagcctggtactgctcaatacctgctctatcagggaaaag
gcggaaacaaccgtacgtaaacgactaacagaatttaagaaaataaaacaacgtaacccg
gagttgctggtgggcgtgctcggatgtatggctgagcgcctgaaggccaaactgctggaa
gaagaaaagctggtggacatggtagtaggccctgatgcttacaggaccctgcccgcgctg
atcgaagaggcggaaaccggccagaaagcagtgaacgtattgcttagccgtgaagaaacc
tatggtgacatcaaccctgtccggctggacagcaatggcgtgaccgcttttgtgtccatc
atgcggggttgtaacaatatgtgctccttctgcgtggtgcctttcacccgtggccgtgag
cgcagcagagacgtagcgtctatcctgcaggaagccacagacctgttcaacaggggctac
cgcgaggtgaccctcctgggacagaacgtggactcctactactgggttgacccgcaggat
gcatctgttgtgaccacctttgccaatctgctcgagcgcgtcgcacttatcagcccattg
ctcagggtacgtttcagcacctcccatccgaaagacattaccgatgaagtgctgttcact
atggcgaagtacgagaacatttgcaaatacattcacctgcctatgcaaagcggcagcacc
cgtatactgcaactgatgaaccgtacctatacccgtgaatggtatatcaaaaaagtagac
cgcatccgtgaaatactacctgactgcgccctgtccacggatgtcatcaccggcttctgc
acagaaaccgaagaagaccaccaggacaccatgagcctgatggactatgccagatacgac
ctcgcctacatgttctactattccgaacgccccggtacactggctgcacgccgttaccag
gacgatgtgccggaagaagtgaaaaaacgcaggctggcggaagtagtagagctgcaccgc
ggacaatcgctcagaagtatgcagcaggatgtgggcaaaacgtttaaagtgctgatcgaa
ggcacctccaaacgctctgaagatcatctcttcggcagaacagatcataacaaggtggta
attttccctaaagaagattaccgtaaaggtgaatatgtatgggtgaaggtggatgattgt
actgccggcactttattgggaacatcgacagggagagtataa
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