Chitinophaga filiformis: MYF79_15550
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Entry
MYF79_15550 CDS
T08225
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfil03400
]
MYF79_15550
DNA repair and recombination proteins [BR:
cfil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MYF79_15550
Archaeal homologous recombinant proteins
MYF79_15550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
UPK72706
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All DBs
Position
complement(3889793..3891037)
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AA seq
414 aa
AA seq
DB search
MKILHTADWHIGQTFYQYDRTYEHQQFLNWLVDTIKEKDIELLIISGDVFDVANPAAGSI
KLFYSFLNKAVKAQPELQIIVTAGNHDSAARLEAPKPLLESSNIHIIGMIERREDGSIDY
EKMIIPVKDKQGNVVLWCLAIPFLRMGDYPAVAESAALYADGVSALYREAYEYALTKKQD
GQGIIAMAHLHTLDAELSDHDKTERVIMGGIEFVPAKAFHEDILYTALGHIHKAQKIGGK
ENIRYSGSPLPMSFSEMNYRHQVVTFEITEGKISNIERCEIPLTTELLRVPSKPLPLPEV
LEQLSQLPEAGEDINTAPYLEVRVLLEGPEPALRHKVETALAGRHVRLAKIDVRYPSGDA
EGGAETTVSADQLQELKPLDVFKQIYRAGYNSDTPEELVDLFNQVLQEITTKEQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattgcatactgcggactggcatatcgggcaaaccttttatcagtatgacaga
acgtatgagcaccagcaatttctgaactggctggtagataccattaaggaaaaagacatt
gagctgttgatcatcagtggcgacgtattcgatgtagccaatccggctgcaggctccatt
aaactattttactctttcctgaataaagctgtaaaagcacaacctgagctccagatcatc
gttactgcaggcaatcacgactctgccgcccggctggaagctcccaagcccctgctcgaa
tcatccaatatacatatcatcggcatgatagaacgcagggaagacggcagcatcgattac
gaaaagatgatcatccctgtaaaggacaaacagggtaatgtcgtgctctggtgcctggct
ataccgttcctgcgcatgggcgactaccctgctgttgctgaaagcgccgcactctatgca
gacggtgtatcggcattgtaccgggaagcctatgaatatgcactgaccaaaaaacaggac
ggccagggcattattgccatggcgcacctgcatacactggacgccgaactgtctgaccac
gacaagacagaaagagtcatcatgggtggaatagagttcgtaccggcaaaggcatttcac
gaagacatcctctacacggccctgggccacatacacaaagcccagaagatcggcggaaaa
gaaaatatacggtacagcggcagtcccctgcctatgtcattttccgaaatgaattacagg
caccaggtggtgaccttcgaaattacggaaggtaagatcagcaacatcgaacgctgtgaa
atacccctcactaccgagctgctgcgcgtaccttccaaaccgctgccactgccggaagtg
ctggaacagctctcgcaattgccggaagcgggcgaagatatcaataccgccccctacctg
gaagtgcgtgtactgctggaagggcccgagcctgccctgcgccacaaggtagagacagcc
ctggcaggcaggcatgtaaggctggccaagatagacgtcaggtacccttcgggagatgcg
gaagggggtgcagaaacgaccgtcagcgccgatcagttacaggaactgaaaccactggac
gtttttaaacagatctaccgggcaggttataacagcgataccccggaagaactggttgac
ctgttcaaccaggtattacaggaaatcaccacaaaagagcagtaa
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