Chitinophaga filiformis: MYF79_15690
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Entry
MYF79_15690 CDS
T08225
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
cfil
Chitinophaga filiformis
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cfil01002
]
MYF79_15690
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfil01011
]
MYF79_15690
Peptidases and inhibitors [BR:
cfil01002
]
Cysteine peptidases
Family C82
MYF79_15690
Peptidoglycan biosynthesis and degradation proteins [BR:
cfil01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
MYF79_15690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
UPK72734
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All DBs
Position
complement(3927587..3929038)
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AA seq
483 aa
AA seq
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MVKNRMLKRACLLLIILMQYFRVAAGQQMYWLPADRAGDRQTLFNYFEQSPLLGLDPHDY
AYTLVQQLKAGSAPADSAAADKQLSEAAIAFFTDVAYGTKVTRVGYDGLKYTPDCRDIPQ
LLHQALADNTFGQLLNKLEPTCPEYRSIKSMIAVYTRRLQESSYHPVKISSDLVDSSNHP
LIEKLYQLGCLDTISYSIQEDTLRTRVRAAQRLFEFMEDGALRRGVLEELNISLEKRLSE
LKHALNTYRWLNCVRQYQSVIVVNIPAAGLYLYQGDSLLLYSRTIVGKEATPTSPLTSSI
DEIIMYPYWTVPYNIATRELLPGIKGNPVAYLDAGNYQVLDKSGKILDPSTINWSSLSRT
NFPYTIRQMNGCDNSLGIIKLNFFNPYSTYLHDTPGKSYFMFNKRYFSHGCIRVEDAIPL
AKLLLPEEAQRIDSLEKAAAAPQKGPVSIQVKQKTPLFILYEVAWPDQQGSIRFYDDVYN
KFR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaaccgtatgctgaaaagagcctgcctgttattgatcatattaatgcagtat
ttccgtgttgcagccgggcagcaaatgtactggctacccgcagatcgtgccggagacaga
cagacactttttaactattttgaacagtctccattactcgggctggatccacatgattat
gcctacacgctggtacaacagttgaaagcgggtagcgcgcctgcagattccgcagcagca
gacaaacagctctccgaagccgccatcgcattctttaccgatgtggcatatggtacgaag
gtaaccagggttggatacgacggattgaaatatacgcccgactgcagggatataccccag
ctgctgcaccaggcgcttgcagacaatacattcgggcaactgctcaataaactggaaccg
acctgtccggaataccgttccatcaaaagtatgatcgctgtatacacccggcggctgcag
gaaagcagttaccatccggtaaagatcagttccgacctggtagacagcagcaatcatccc
ctgatagaaaagctctaccagctgggctgcctggataccatcagctacagcatacaggaa
gatactttaaggacaagggtccgcgcagcacaacgcctgttcgagttcatggaagatggc
gccctgagacgcggtgtactggaagagctgaatatatcactggaaaaaagattatccgag
ttaaaacatgccttgaatacataccgctggctgaactgcgtacgtcaataccagtcagtc
attgtcgtgaatatccccgctgcgggactgtatctttaccagggcgacagcctgctgctc
tattcccgtaccatcgtgggaaaagaagctacgccaacttctccccttacaagcagtata
gacgagatcatcatgtatccttactggacggtgccttacaacattgccacgagggaactg
ctgccaggcatcaaaggtaatccggtagcttacctggatgcaggcaattaccaggtattg
gacaaatcaggcaaaatactggatccttccaccatcaactggtcatctctcagcaggacc
aattttccttataccatccggcagatgaacggctgcgacaattcactgggcatcatcaag
ctgaatttcttcaatccttacagtacctacctgcacgatacaccgggtaaaagctatttt
atgttcaacaaacggtatttcagtcatggatgtatcagggtggaagatgccatcccgctg
gcaaagctgctgttgccggaggaagcgcaacgtatagacagccttgaaaaagcggctgcc
gcaccgcagaaaggccctgtcagcatccaggtaaagcagaaaacgcccctgttcatactg
tatgaagtagcctggcccgatcaacagggcagcatccggttctatgacgacgtttataat
aagttcagataa
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