Chitinophaga filiformis: MYF79_16070
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Entry
MYF79_16070 CDS
T08225
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cfil
Chitinophaga filiformis
Pathway
cfil00300
Lysine biosynthesis
cfil00470
D-Amino acid metabolism
cfil01100
Metabolic pathways
cfil01110
Biosynthesis of secondary metabolites
cfil01120
Microbial metabolism in diverse environments
cfil01230
Biosynthesis of amino acids
Module
cfil_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MYF79_16070 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MYF79_16070 (dapF)
Enzymes [BR:
cfil01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MYF79_16070 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
FAIM1
Motif
Other DBs
NCBI-ProteinID:
UPK72809
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All DBs
Position
complement(4027193..4027978)
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AA seq
261 aa
AA seq
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MSAIHFYKYQGTGNDFVIMDNRKGEYNFLTEEQVHFLCDRRFGIGADGLMLLNTQEGYDF
GMKYYNADGRESSMCGNGGRCLVAFARKMGLNSEKLSFLAVDGPHEATLKGDNWVNLKMQ
DVNGVELGSLYSYLNTGSPHFVKFVEDVQAVDVYTEGKQIRYNDRFAKEGTNVNFVQPLD
KGIFVRTYERGVEDETYSCGTGVTAAALMTAGPEEKEYVIPVQTLGGNLEVRFTKTGERS
YNNIWLCGPATLVFEGNITLP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaattcatttctacaaataccagggaaccggcaatgattttgtgatcatggac
aaccggaaaggcgagtataactttttgacggaagaacaggtacattttctgtgcgaccgc
cgtttcggtatcggggcggatggactgatgcttctcaacacacaggaaggttatgatttc
ggcatgaaatattacaacgctgacggccgcgaaagcagtatgtgtggtaatggtggccgc
tgtctggtagcctttgcccgtaaaatggggctcaacagcgaaaaactcagcttcctggcg
gtagatgggcctcatgaagctacgctcaaaggagataactgggtgaacctgaaaatgcag
gacgtaaatggtgtggaattaggctccctctattcctatctcaacaccggctctcctcac
ttcgtgaagtttgtggaagatgtacaggcagtagatgtttacaccgaaggaaaacagatc
cgctataacgatcgctttgcgaaagaaggcaccaacgtcaactttgttcagccactcgat
aaaggcatcttcgtccgtacctatgaacgcggtgtggaagatgagacctattcctgcggt
accggcgtcactgctgctgccctgatgacggcaggcccggaagaaaaagaatatgttata
cccgtacagacattgggcggaaacctggaagtacgttttactaaaaccggcgaaaggtcc
tacaataatatctggctctgcggacctgcaacccttgtttttgagggaaatatcacatta
ccgtaa
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